Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq638 123 3e-23 >seq638 Length=259535 Score = 123 bits (136), Expect = 3e-23 Identities = 248/361 (69%), Gaps = 14/361 (4%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGAT 109556 ||||| |||||| ||||| |||||||| ||||||||| || ||||| | ||||| | Sbjct 7780 GTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACGATGGT 7721 Query 109557 ACACTTTTGGCTA-ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGT 109615 | || || | || |||||||| |||||||| | |||||| ||||| || ||| Sbjct 7720 CCTCT----GCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATG- 7666 Query 109616 CCACGA-TGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGAC 109674 | ||| | || || ||||||||| | | | ||| | | ||||| || | ||| Sbjct 7665 CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCAGAC 7606 Query 109675 CAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTG--TTGACCACGACAAATTCAC 109732 || ||||| || ||||| | | || | || ||||| || || || | Sbjct 7605 CACAGACCACACTGCACCAGATCCTTGAGCAGC--CATGGATTGACAACTTGGAACTCGC 7548 Query 109733 CAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGC 109792 |||| || ||| || | |||||||| | || ||||| || || ||||| ||||||| Sbjct 7547 CAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGTTGC 7488 Query 109793 CTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGAC 109852 | ||||| || | ||| || || ||||||||||| ||||| | | ||||| |||| || Sbjct 7487 CCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGACAC 7428 Query 109853 C 109853 | Sbjct 7427 C 7427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588928771487000