Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1214 143 6e-29 seq373 143 6e-29 seq2574 100 6e-16 >seq1214 Length=170273 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | || || ||| Sbjct 100679 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCG 100738 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || ||||||||||| ||||| || || ||||| || Sbjct 100739 AGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGG 100798 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||| ||| ||||| |||||||| | ||||| Sbjct 100799 ATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTG 100858 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 100859 CCCGTGAGGGTCTTGACGAAGATCTGCAT 100887 >seq373 Length=59380 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||| || | || || | || ||||| ||||| Sbjct 245 GTGCAGTGTCGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTCTTCCAGCTG 186 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||||||||| || || |||||||| ||||| || || ||||||||||| || Sbjct 185 CTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTT 126 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||||| || || || ||||| |||||| || ||||| | |||||| || || Sbjct 125 GGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCTTGCCCGT 66 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | |||||| Sbjct 65 CAGGGTCTTGACGAAGATTTGCAT 42 >seq2574 Length=14985 Score = 100 bits (110), Expect = 6e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| |||| || || | ||||| ||||||||||| || ||||| || Sbjct 3 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATC 62 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| ||||| || || || ||||| || || || |||||| || || Sbjct 63 AGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 122 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132 |||||||| || || || ||||| || | ||||| || || | || || ||||| Sbjct 123 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAG 182 Query 195133 ACTTGCAT 195140 | ||||| Sbjct 183 ATCTGCAT 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109390409280305