Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1214 143 6e-29
seq373 143 6e-29
seq2574 100 6e-16
>seq1214
Length=170273
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || |||||||| || || || ||||| |||| || || | || || |||
Sbjct 100679 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCG 100738
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || ||||||||||| ||||| || || ||||| ||
Sbjct 100739 AGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGG 100798
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || |||||||| ||| ||||| |||||||| | |||||
Sbjct 100799 ATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTG 100858
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 100859 CCCGTGAGGGTCTTGACGAAGATCTGCAT 100887
>seq373
Length=59380
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||| || | || || | || ||||| |||||
Sbjct 245 GTGCAGTGTCGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTCTTCCAGCTG 186
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || ||||||||||| || || |||||||| ||||| || || ||||||||||| ||
Sbjct 185 CTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTT 126
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| ||||| || || || ||||| |||||| || ||||| | |||||| || ||
Sbjct 125 GGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCTTGCCCGT 66
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | ||||||
Sbjct 65 CAGGGTCTTGACGAAGATTTGCAT 42
>seq2574
Length=14985
Score = 100 bits (110), Expect = 6e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| |||| || || | ||||| ||||||||||| || ||||| ||
Sbjct 3 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATC 62
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || ||||| ||||| || || || ||||| || || || |||||| || ||
Sbjct 63 AGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 122
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|||||||| || || || ||||| || | ||||| || || | || || |||||
Sbjct 123 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAG 182
Query 195133 ACTTGCAT 195140
| |||||
Sbjct 183 ATCTGCAT 190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109390409280305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |