Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq638 405 1e-107 seq3478 134 3e-26 >seq638 Length=259535 Score = 405 bits (448), Expect = 1e-107 Identities = 1145/1739 (66%), Gaps = 60/1739 (3%) Strand=Plus/Minus Query 212691 TGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATG 212750 |||| |||||| ||||| |||||| ||||| | | | || || ||||| | | | Sbjct 7785 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 7726 Query 212751 ATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAG 212810 || ||||| |||| |||||| ||||||||| ||| | |||| ||| ||||||| | Sbjct 7725 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATG 7666 Query 212811 CCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------CATGT 212862 | | | || ||||| | ||| || || ||||| || | ||| || || Sbjct 7665 CTGCGAATATTCTGGATAGAGCC-------ATCCTCAGCGATG-ATGCGGTTCTTCAGGT 7614 Query 212863 CCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGA 212922 |||| ||| || || | | |||| ||||| ||| || ||||| | |||| Sbjct 7613 CCTCAGACCACAGACCACACTGCACCAGATCCTTGAGCAGCCATGGATTGACAACTTGGA 7554 Query 212923 AGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGT 212982 | || || | |||||| | | ||| || | ||| || || |||||||| | || ||||| Sbjct 7553 ACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGT 7494 Query 212983 TGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCC 213042 |||| ||||| ||||| | ||| ||| ||||||||||| |||| || | ||||| | Sbjct 7493 TGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGC 7434 Query 213043 TCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGG 213101 || ||||||| ||| ||| ||| | |||||||||| |||| | Sbjct 7433 GGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGT-CCCAGTCCCAGAGATCAGAGGG- 7376 Query 213102 TCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCC 213161 || | | || |||||||||||| |||||| ||| || | | ||||| ||| Sbjct 7375 --CTTGACATT---GTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCC 7321 Query 213162 TGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCG 213221 | ||| || ||||||||||||| ||||||| | || || || || ||||| ||| Sbjct 7320 TCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCG 7261 Query 213222 TAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGC 213281 | ||||||||| || || |||| | |||| |||| ||||| || ||| ||| ||| Sbjct 7260 TGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGC 7201 Query 213282 ATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGT 213341 || | | ||| |||| ||||| |||||||| || | ||| || || | ||| Sbjct 7200 ATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGG 7141 Query 213342 CTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTG 213401 | || ||| |||| | |||| | || || |||| |||||||||||||| Sbjct 7140 CGCATGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTC 7081 Query 213402 AGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG---TGATTGAACACGTAG 213458 |||||||| | | || | |||||| | ||| ||| | | || | | | | Sbjct 7080 AGGTTGCGAACGACGACCTGGGTGACTTCATGCAGCAACTGGAAGTTATAGCGCTCATT- 7022 Query 213459 CCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCC 213518 | ||| | || |||| ||||||||||| ||||||||||| || || ||||| Sbjct 7021 --CTCGTAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCA 6964 Query 213519 TGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | || | | ||||| |||||||| ||||| |||||| || || |||||||| ||| Sbjct 6963 TCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGG 6904 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 |||| ||||| ||| |||||| ||||||||| | |||| ||||| || ||| Sbjct 6903 TTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTC 6844 Query 213639 TCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGACCACCCGCCTGA 213696 || || | | | || || ||| |||||| | | ||||| | | || Sbjct 6843 TCGGTTTGAGCCTCGAGGAT--GGCATACCAGAGCTTCTGCGCCTTCAGG----GTCTTT 6790 Query 213697 CAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACC 213755 || || | | || |||||||| ||||| || | | ||| || | ||| || Sbjct 6789 TGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAG 6730 Query 213756 CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGAC 213814 | | || || || || ||| ||||| || ||||||| |||| | ||||| || Sbjct 6729 TCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCT-AC 6671 Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874 | || |||||| || ||||||| ||| || || ||| ||||| | | | ||| Sbjct 6670 ACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTC 6611 Query 213875 GTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTC 213934 ||| ||| ||| || ||||| || || || || |||| || |||||||| ||||| Sbjct 6610 TTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTC 6551 Query 213935 CATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCAC 213991 || |||||||||||| || || | || | ||||| ||||| || || | ||| Sbjct 6550 CAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGT 6491 Query 213992 CATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTAT 214051 ||||||||| |||| | || | | || |||||| |||||||| || || || Sbjct 6490 GTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGAT 6431 Query 214052 ATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACT 214107 || ||||||| ||| | || ||| |||| ||| || ||||| || || || Sbjct 6430 GTAGGAGCCGGTGGCAC---GGATGC-GGTGGACGTTGAGACCAATGCCTCCAGCCATCT 6375 Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167 ||||||||||||| ||| | ||| || || |||||| | |||||||| || | | Sbjct 6374 TGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCA 6315 Query 214168 GGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTG 214226 || | | |||||| ||| | || | ||||| | || ||| | ||||| ||||| Sbjct 6314 TGTCAACGAGGAAGCACGACGACAACT-GCGCCTGAGGCGTGCCGGCATTGAACAGCGTT 6256 Query 214227 GGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGG 214286 || || || | | |||||||| || | | |||||||||| || || | Sbjct 6255 GGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCG 6196 Query 214287 ATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCTCTATG 214346 |||| || | ||| | |||| | ||||||||||||||| |||| ||| | | Sbjct 6195 ATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACG 6136 Query 214347 GGT---CCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | || ||| | ||||| || || || ||||| || |||||||| |||||||| Sbjct 6135 ACTTTACCGTTGAG---TTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGTA 6080 >seq3478 Length=17986 Score = 134 bits (148), Expect = 3e-26 Identities = 349/519 (67%), Gaps = 15/519 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| |||||||| | | ||||||||||| Sbjct 8703 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTC 8644 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||| ||||| | | || || | | | || ||| | | || | Sbjct 8643 CATGAAGTCGAAAGGGTTAGTAGACTTGTAGATCT-TCTCGTTGCCGAGAGCGACGAGGA 8585 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || |||||| | |||||||| | ||| | | || |||||||| | |||| Sbjct 8584 GACGGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGCAGGG 8525 Query 48018 ACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| |||||| |||| || || ||||||||||| || || || || | || Sbjct 8524 -CACAGGGCAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATG 8466 Query 48077 TGCTTA-ACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 |||| ||||| || ||| || | ||||| |||||| || | | |||| ||| Sbjct 8465 -GCTTCCACGCGCTGCTTGCTGGGGCGGTTGTT---CAGGTG--TGAGA-ACAGCAAGCA 8413 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||| ||||| |||||| || ||||| || |||||| ||||||||||| || || Sbjct 8412 GGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCC 8353 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 |||||| | || | || || |||||||| || | ||||||| |||| |||||| || Sbjct 8352 AGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAAT 8293 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 || || || || || || || || | || || | | || | ||| ||| Sbjct 8292 ACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCACGGTCCTGGAT 8233 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||| || |||||||| |||||||| |||||| || Sbjct 8232 CCACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAAGG 8194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931458102713600