Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq638 224 2e-53
seq3478 104 4e-17
>seq638
Length=259535
Score = 224 bits (248), Expect = 2e-53
Identities = 807/1232 (66%), Gaps = 54/1232 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| ||||| ||||||||||||||||| |||||| |||||| || ||| | ||||| ||
Sbjct 7272 GTGAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAG-CTCACGAGCCTCAGG 7214
Query 221476 AGAAGTGAAGGGCATACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534
|| ||| ||||| || || | ||||| | |||||||| ||||| || || | |
Sbjct 7213 TGACTCGAAAGGCATGCGGAGGGCCAAGAAAG-CATCGGCCAGACCCTGGACGCCCACGC 7155
Query 221535 CGATGGGCCTGTGTCTCCTGTTGGAA--GCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592
| || || | ||| | | ||||| |||| || || || || ||||| |||||
Sbjct 7154 CAATAGGACGGTGGCGCATGTTGCTCTTGCGG--GCCTCCGGAACAGGATAGTGGTTGAT 7097
Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652
||||| | ||||| ||||| || || ||| | || || |||| ||||
Sbjct 7096 ATCGATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCATGCAGCAACTGGAA 7037
Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712
|| | | | ||| ||| || || | || || ||||| |
Sbjct 7036 GTT--ATAGCG-CTCATTCTCGTAGTCGACGA-----ACTGTGGC----AGGGCGATAGA 6989
Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772
|||||||| || || || ||||| || | ||||| |||||||| || || ||
Sbjct 6988 CGCCAGGTTGCAGACAGCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAG 6929
Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832
|||| || ||||| || |||| || || || |||||| ||||| |||||
Sbjct 6928 GTTGGAGCTGCGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTT 6869
Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892
||| | ||| ||||| ||| ||||| |||||| | || || | |||||| |
Sbjct 6868 GTACAACATGAAGGGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCT- 6810
Query 221893 TCTG-GCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGAGC 221950
|||| || ||| ||| | ||| | || ||||||| || | | | || || |||||
Sbjct 6809 TCTGCGCCTTCAGGGTCTT-TTGGCCGCGACCCTCGCGCTCGTACTTCTCG-TACAGAGC 6752
Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGA 222010
| | |||| || ||||| ||| | ||||| || ||| | ||| |||||||||
Sbjct 6751 CT--CGAACTCCTCGCCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGA 6694
Query 222011 CTCCAGT-GC--TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC 222067
|||||| || || || ||| || | || ||||||||| ||||||||||| || ||
Sbjct 6693 GTCCAGTCGCCGTTCTTCTCT---ACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCA 6637
Query 222068 TGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAAC 222127
| ||||| || | | || ||| ||| |||| ||| |||| ||| || | |||
Sbjct 6636 AGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAAC 6577
Query 222128 TCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTG 222187
|| || | ||||||||||| |||||||| |||| ||| | ||| ||||| ||||| |||
Sbjct 6576 TCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTG 6517
Query 222188 CCACCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTC 222245
||||||||||| || ||| ||| | |||||||| || | | || | | |
Sbjct 6516 CCACCCTGATCGACGTATC--GGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGC 6459
Query 222246 CGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAG 222305
| ||||| ||||||||||| ||||| | ||| ||| | || | | || |
Sbjct 6458 CATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCAC---GGATGC-GGTGG 6403
Query 222306 AC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361
|| | || || || || || || ||||||||||| ||| |||| || || ||
Sbjct 6402 ACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGGTATCA 6343
Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421
||||||||| || ||||||||| | || | || || || ||||||| ||| |
Sbjct 6342 TAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCC 6283
Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481
| | | | ||| || |||||||| || |||||||| ||| | | |||||
Sbjct 6282 TGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATG 6223
Query 222482 AGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTC 222541
| ||| ||||| | || || ||||||||||||| || | ||| | |
Sbjct 6222 TAGTTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGC 6163
Query 222542 ATGTACATGTACTGGGGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTACGA 222597
|| ||||| ||| |||| ||| || ||| || | ||| | ||| || |||||
Sbjct 6162 ATCAGCATGTGCTGTGGCCGCTCGAC--GACTTTACCGTTGAGTT--TGAGGAGATACGA 6107
Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGA 222629
|| || |||||||| |||||||| ||||
Sbjct 6106 ACGCTCGAGGGTCTTGAAGCCAAAGTA-TTGA 6076
Score = 91.5 bits (100), Expect = 3e-13
Identities = 133/186 (72%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 221069 TCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGA----CCATGTGCTTGTTCACCAC 221124
|| || | ||| ||||| | || |||| |||||| ||||| | ||| || ||
Sbjct 7614 TCCTCAGACCACAGACCACACTGCACCAGATCCTTGAGCAGCCATG-GATTG---ACAAC 7559
Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184
|||||| || || | |||||| | | ||| || | ||| || || | || || | ||
Sbjct 7558 TTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCA 7499
Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244
||||||||||||||||||||| | || ||| ||||||||||| |||| || || ||
Sbjct 7498 CTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCT 7439
Query 221245 GTTGCG 221250
||||||
Sbjct 7438 GTTGCG 7433
>seq3478
Length=17986
Score = 104 bits (114), Expect = 4e-17
Identities = 287/446 (64%), Gaps = 5/446 (1%)
Strand=Plus/Plus
Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936
|||| || || || ||||||||||| || || || || ||||| || | || || |||
Sbjct 8261 AGCGCCTTGTTGCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGCGCTTTCGCTTCCA 8320
Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996
|||||||||| ||| || || ||||| || ||| ||| |||||||| ||||||
Sbjct 8321 TCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATCT 8380
Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056
| ||||||||||| |||| || || |||||| |||| | | | ||| || |
Sbjct 8381 CTCGTGACGAGGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTC---ACACCTGAACA 8437
Query 26057 ACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115
|| || |||| || ||| | ||||| | || ||||| | || ||||||
Sbjct 8438 AC-CGCCCCAGCAAGCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGCCATTGAGAAG 8496
Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175
||||| | | |||||||| || | ||||
Sbjct 8497 GAGTTCCTGACCGAGGCCTTGCCCTGTGCCCTGCTCGGCATGAATGCCAACTTGATGAAG 8556
Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC 26235
|| ||||| || | || ||||||| ||| || | || || || | |||||
Sbjct 8557 CAGTACATCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGCAACGAGAAGATCTAC 8616
Query 26236 AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTC 26295
| | ||||||| |||||||| ||||| ||||| || | | |||||||||||||||
Sbjct 8617 AAGTCTACTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGGAAGACCAACTTC 8676
Query 26296 TTTGAAAAGAGGGTCGGCGACTATCA 26321
|| || ||| | || || ||||| ||
Sbjct 8677 TTCGAGAAGCGTGTTGGTGACTACCA 8702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928770318257600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |