Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq638 143 2e-29 seq1214 95.1 1e-14 >seq638 Length=259535 Score = 143 bits (158), Expect = 2e-29 Identities = 457/703 (65%), Gaps = 13/703 (2%) Strand=Plus/Minus Query 139297 TCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCG 139356 |||||||||||||| ||||| || | ||||| || |||||| ||| | ||| || Sbjct 6777 TCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGGCCG 6718 Query 139357 CGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAAC 139416 | |||| || || ||||| || | ||| |||||||| || || ||| ||||||| Sbjct 6717 GGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGAAG 6658 Query 139417 AGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATG 139476 |||||||| ||||| | || | | | || || || |||||| || | Sbjct 6657 AGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGG 6598 Query 139477 TTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCC 139536 || || || ||||| || || || |||||||||||||| ||||| |||||||| Sbjct 6597 TTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCA 6538 Query 139537 ATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACG 139593 | || || || |||||||| |||||||||| ||| ||| || ||||| || Sbjct 6537 AAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACA 6478 Query 139594 CGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA-CTGTTG 139650 |||||||| || | || | | || |||||||||| | |||| ||| | | || Sbjct 6477 CGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTG 6418 Query 139651 CGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACG 139710 || |||| | || || |||| || || || || | | ||||| || | | Sbjct 6417 ---GCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATGGCA 6361 Query 139711 CAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAG 139770 || | || || || || || |||||||| |||| ||| || || ||| Sbjct 6360 CAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAG 6301 Query 139771 CATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTG 139830 || ||||| | |||| | ||||||||| ||||| || || |||||| ||| Sbjct 6300 CACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTG 6241 Query 139831 AACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGG 139890 || | | || ||||| | | ||| || || | | ||| | || | || | Sbjct 6240 AAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCAG 6181 Query 139891 ATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtt 139950 || || |||| ||| ||||||||||| || || ||| ||| | || || | || | Sbjct 6180 ATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGACTTTACCGTTGAGT 6121 Query 139951 tttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTA 139991 || ||||| | || ||| ||||||||| |||||||||| Sbjct 6120 TTGAGGAGATACGAACG--CTCGAGGGTCTTGAAGCCAAAGTA 6080 Score = 107 bits (118), Expect = 2e-18 Identities = 316/478 (66%), Gaps = 27/478 (6%) Strand=Plus/Minus Query 138541 TAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTC 138600 || |||||| || | |||||||| | |||||||| ||||| ||||| | || | Sbjct 7527 TAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAG 7468 Query 138601 GCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCC 138660 || || |||||| ||||| ||| | || || | |||||| ||||||| || Sbjct 7467 GCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCC 7408 Query 138661 TTGA--GCGACGACCAGTCCCACAAATCGCTAGGTTTT---TTGTTCCACATATCGTACT 138715 || | ||| | ||||||||| | ||| || || ||||||||||| ||||||| Sbjct 7407 TTCAAGGCGTC--CCAGTCCCAGAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACT 7350 Query 138716 GTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCA--AACTCTTG 138773 | | || ||| ||||| || ||||| || ||| ||| ||| |||| Sbjct 7349 GCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGATGAGTAGGGGCCATCAAC-CTTG 7291 Query 138774 CGCCA----ACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCT 138829 || | || || ||| ||| || | | ||| || || ||| ||||||| Sbjct 7290 -GCAATGTCACACGATGCGGT----GAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCT 7236 Query 138830 GATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGG 138889 || ||| || ||||| | |||| | ||||||||||| | ||| || |||| Sbjct 7235 TGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGGGCCAAGAAAGCATCGG 7176 Query 138890 CCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGG--C 138947 |||| || || |||||||| || | ||| || ||||||| || ||| |||||| | Sbjct 7175 CCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCA----TGTTGCTCTTGCGGGCC 7120 Query 138948 TTCG--ATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCT 139003 | || | |||||| | ||| | ||||||||| ||||| | || || ||||| |||| Sbjct 7119 TCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGTTGCGAACGACGACCT 7062 >seq1214 Length=170273 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | || Sbjct 100887 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 100828 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || ||| Sbjct 100827 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 100768 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || ||||| ||||| | | | | || || || ||| Sbjct 100767 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 100708 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||| |||| |||| |||| || || Sbjct 100707 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGG 100661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449861523836200