Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1436 107 2e-18 >seq1436 Length=40487 Score = 107 bits (118), Expect = 2e-18 Identities = 176/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 || ||||| |||||| || || |||||||| | ||| | || ||||| | ||| Sbjct 24717 ACGAACTTCTTGATGAAGATGTCGAGGAGGTCCTGAAGCTTGGCCGACTCGTGAGCACCG 24776 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||| ||| | || || | ||| |||| | || || || || |||||| | ||| Sbjct 24777 TTGATGATCCAACGGTCATCCTTGGGGTCGATGTTGGTCTGGGCCCCAAGCTCGAAGCCG 24836 Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530 ||| |||| || | || | || || |||||| || |||| || || |||| Sbjct 24837 AAGAACTTGATCAGATAGGCACCAGGGCGATCAAGCGACTGAGCGACGCTGGTCAGGTTG 24896 Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590 |||| |||||||||||| || |||||||| ||||||||||||| | |||| ||| Sbjct 24897 ACGACGACAGTCTTGATACCATTGCCCTTGCCTTCGACCTTGGTCTGAAGGCGCTCCATC 24956 Query 34591 TTGTAGCGGTAGAA 34604 ||||| || ||||| Sbjct 24957 TTGTAACGATAGAA 24970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412809322882595