Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq638 145 1e-28 seq4787 132 8e-25 seq1153 116 6e-20 seq3478 111 2e-18 seq4048 105 1e-16 >seq638 Length=259535 Score = 145 bits (160), Expect = 1e-28 Identities = 268/393 (68%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||| || || || |||| ||| ||||| || | ||| || | | ||| ||||| Sbjct 6511 CTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGA 6452 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | |||||||||||| || | ||||| ||| | ||| || | ||| || | || Sbjct 6451 CGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACC 6392 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||||| || ||| ||||||||| | || || | ||||| || || ||||||||||| Sbjct 6391 AATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTC 6332 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | || ||||||||||| |||| | | |||||| Sbjct 6331 AATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCC 6272 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||||||||| ||||| |||| ||| ||| | ||| | ||||||| | |||||| Sbjct 6271 GGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGT 6212 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 | || || | | | | | || ||| ||| || ||| | ||||| Sbjct 6211 CTCAAGAACCCTCTCGA-----TGTT----GTC------CCCCCAGATGCCAACAGCGAC 6167 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGAC 2073932 ||||| | ||||| ||| || ||||||||||| Sbjct 6166 ACGCATCAGCATGTGCTGTGGCCGCTCGACGAC 6134 Score = 116 bits (128), Expect = 6e-20 Identities = 356/544 (65%), Gaps = 26/544 (5%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGAT-GGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCC 2069309 |||||||| || ||||| || |||| || || | | | | ||||| || ||||||||||| Sbjct 7914 TGGTCGACTGTGAACTGAATCGGCGCTGCCG-CTGCCTGTGTGCGGAGGTAGTACATGCC 7856 Query 2069310 GGTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGG 2069369 |||||||| || | ||| || | |||||| ||||| || | | | | Sbjct 7855 AGTCTTGAGACCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGAT---CTTGCCCATAG- 7800 Query 2069370 GACGGCACA-----GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCG 2069424 | ||| || || | ||| ||||||||| |||||||| ||| | || ||| Sbjct 7799 -AAGGCTCACGCATGTGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCG 7741 Query 2069425 GCCGCCATGT---CGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCC 2069481 || ||||| | |||||||| | | || | |||||| ||||||||| | |||||| Sbjct 7740 GCAGCCATCTGCACGATGGTC---CTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCC 7684 Query 2069482 TTGAGATGCGGCGGCACCTCGTCGTCATCAAAGCC-CTGCACCGAGCCCTGCGCTGCGAT 2069540 |||| | || || | | | || ||| | ||||| | | | ||||| Sbjct 7683 TTGATGT-------CATCTGGGATGCTGCGAATATTCTGGATAGAGCCATCCTCAGCGAT 7631 Query 2069541 GAGGCGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTG 2069600 || ||||| | ||| | |||||| || | | || || || || ||| Sbjct 7630 GATGCGGTTCTTCAGGTCCTCAGACCACAGACCACACTGCACCAGATCCTTGAGCAGCCA 7571 Query 2069601 GCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGAT 2069660 | ||||| || || ||||| | ||||||||||||| ||||||||| || Sbjct 7570 TGGATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATA 7511 Query 2069661 GACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGC 2069720 | ||| | |||| ||||||||||||||||||| |||| ||| ||||||||| |||| Sbjct 7510 GGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGC 7451 Query 2069721 CACGAGCAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780 || | || |||||| | |||| ||| | | ||| || |||||||||||| Sbjct 7450 CATCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTC 7391 Query 2069781 CCAG 2069784 |||| Sbjct 7390 CCAG 7387 Score = 114 bits (126), Expect = 2e-19 Identities = 287/439 (65%), Gaps = 10/439 (2%) Strand=Plus/Minus Query 2071570 GAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCT 2071627 ||| ||| || || ||| ||||| ||||||| | || ||||||| ||||||| || Sbjct 6954 GAATACTCGATGATCTCAGTGCAAAGGTTGGAG--CTGCGAATGGTGCCAAGGTTCTTCT 6897 Query 2071628 GGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCT 2071687 ||||||| | ||||| || ||||||| || |||| |||| || |||||| | | Sbjct 6896 GGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTTT 6837 Query 2071688 GCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCG---CGCGGC 2071744 | ||| || |||||| |||| | | |||| || |||| | |||| | Sbjct 6836 GAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAG---GGTCTTTTGGCCGCGAC 6780 Query 2071745 CCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGC 2071804 ||| | || || || || | |||||| ||| ||| |||| Sbjct 6779 CCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGGC 6720 Query 2071805 CGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAA 2071864 |||| |||| ||||| | || | |||||||||| || | || || ||| | Sbjct 6719 CGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGA 6660 Query 2071865 ACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGT 2071924 | || || |||| ||| | ||||| || || || ||| ||| ||||| |||| Sbjct 6659 AGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGT 6600 Query 2071925 GGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGG 2071984 ||||||| ||||||||| | |||| || || |||||||| |||||||||||| || Sbjct 6599 GGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGG 6540 Query 2071985 CAAAGGCGCCCTTGCGCTT 2072003 |||| || || |||||| Sbjct 6539 CAAAAGCACCGGGGCGCTT 6521 >seq4787 Length=155596 Score = 132 bits (146), Expect = 8e-25 Identities = 274/405 (68%), Gaps = 2/405 (0%) Strand=Plus/Minus Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979 || |||| || |||||||| | ||||| || || || ||||||| | || | | Sbjct 72109 GGGTCGAGAAATACCGCCCCGTCTTCCTCGATGATATAGTCGGCAACGTCGAGACCATCG 72050 Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039 |||||| | ||| |||||||| |||||| || || | | | || || Sbjct 72049 AGCGGCTCAAGATCATCGCCAAGGACGGCAATATGCCCCACGTCATTATCTCCGGGATGC 71990 Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCG 2019099 | || | |||||||| || | ||||||||||||| ||| | || | || Sbjct 71989 CTGGTATCGGCAAGACGACCTCGGTGCTGTGCCTGGCGCGCCAGCTGCTCGGTGATGCGT 71930 Query 2019100 CCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTA 2019159 | | ||||| || ||||| || ||||| ||||| |||||||| | ||||||||||| | Sbjct 71929 ACAAGGAGGCGGTCCTCGAGCTGAATGCCTCAGATGAGCGCGGAATCGACGTCGTGCGCA 71870 Query 2019160 GAATCATCAAGCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGA 2019219 ||||||| | ||| ||| | || ||||||| | |||||||||||| | Sbjct 71869 ACCGCATCAAGGGTTTCGCGCAGAAGAAGGTCACCCTGCCGGCGGGCCGCCACAAGATCG 71810 Query 2019220 TCATCCTCGATGAGGCCGACTGCCTTACG-TCGGCGGCCCAGCAGGCCCTCCGATCGACC 2019278 ||||||| |||||||||||| || | ||| |||| || |||||||| || || ||| Sbjct 71809 TCATCCTTGATGAGGCCGACAGCATGACGAGCGGC-GCGCAGCAGGCACTGCGGCGGACA 71751 Query 2019279 ATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAAC 2019323 ||||| | ||| | || || ||||| || || | || || ||| Sbjct 71750 ATGGAGATCTACTCGAATACCACGCGCTTCGCCTTCGCATGTAAC 71706 >seq1153 Length=145862 Score = 116 bits (128), Expect = 6e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||||||||| | || || ||| | ||||| || ||||||||| | ||||||||| Sbjct 68947 AGGTCGACCAGGAGATGCTTTTCGAGATCATCCTGGCTGCCAACTACATGGACATCAAGG 69006 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 ||||||| || | || |||||||| || |||||| | || ||||||||||| || |||| Sbjct 69007 CCCTCCTTGACGTTGGCTGCAAGACTGTCGCCAACATGATTAAGGGCAAGTCTCCAGAGG 69066 Query 2035732 ACATCCGCAAGACCTTTAACAT 2035753 | || |||||||| || ||||| Sbjct 69067 AGATTCGCAAGACTTTCAACAT 69088 >seq3478 Length=17986 Score = 111 bits (122), Expect = 2e-18 Identities = 177/252 (70%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| ||||||||||| || | | Sbjct 8716 TGACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAA 8657 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||| | | | |||| ||||||| |||| Sbjct 8656 GGGAGATGTTCTCCATGAAGTCGAAAGGGTTAGTAGACTTGTAGATCTTCTCGTTGCCGA 8597 Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 | ||||| || || ||||||||||||||||| |||||||| ||| | | ||| || Sbjct 8596 GAGCGACG--AGGAGACGGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATT 8539 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||||| || || ||||| | |||| | | ||||| ||||| || | || || Sbjct 8538 CATGCCGAGCAGGGCACAGGGCAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAGC 8479 Query 794129 CTCGATGATGAT 794140 ||| | ||||| Sbjct 8478 ATCGGTAATGAT 8467 >seq4048 Length=40291 Score = 105 bits (116), Expect = 1e-16 Identities = 121/160 (76%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 1485546 GGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC-GCCAGGCGGCCGG 1485604 ||||||||||||||||| | ||| ||| ||| || || || ||||| || || Sbjct 24134 GGTCTGGATCTCGCGGGAGGAGATGGTGGACTTCTTATT-GTAGGCAGCCAGCTTGCTGG 24192 Query 1485605 CCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATT 1485664 |||| ||| ||| || |||| ||||||||||| |||||||||| ||| ||||| | Sbjct 24193 CCTCAGTGGCGACACGCTCGAAGATGTCGTTGACGAACGAGTTCAGGATGGACATGGCAC 24252 Query 1485665 TGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||| || ||||||||| ||||||||||| || Sbjct 24253 GGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 24292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915564007191185