Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1883 87.8 7e-12 >seq1883 Length=241172 Score = 87.8 bits (96), Expect = 7e-12 Identities = 119/163 (73%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | || || ||||||||||| ||||| || | |||||||||| ||||| Sbjct 94096 CTCGATCAAGTGAGCAATGGTCATACGAGATGGAATAGCGTGCGGGTTGATGATGATGTC 94037 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATAT-CTTCTTCAGGTACAATCAAACCAA 309802 || | || || | || |||||||||| | || || | |||| | | ||||| Sbjct 94036 TGGCGTGATACC---CTCTCGGGTGAAAGGCATGTCCTCCTGCCGGTA-GGTGACACCAA 93981 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| ||||| ||| |||| | ||| || |||||||| ||||| Sbjct 93980 TAGTACCCTTCTGACCGTGGCGGGAGGCGAACTTGTCCCCAAT 93938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951813962954120