Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq638 367 1e-96 seq2574 118 1e-21 seq1214 118 1e-21 seq373 102 8e-17 seq6049 93.3 4e-14 >seq638 Length=259535 Score = 367 bits (406), Expect = 1e-96 Identities = 971/1454 (67%), Gaps = 44/1454 (3%) Strand=Plus/Minus Query 148258 GATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACG 148317 |||| || || || |||||||| ||||||||||| ||| |||| | |||| ||| | | Sbjct 7568 GATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGG 7509 Query 148318 GTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTA 148377 | ||||| ||||||||||||||| ||||||| |||| || ||||||||| ||| | Sbjct 7508 GCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCA 7449 Query 148378 CCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCC 148437 || || |||||| | |||| | | || || ||| ||||| || ||||||||| Sbjct 7448 TCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCC 7389 Query 148438 AGAGCGGCGACGG--TGTCA-CGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGG 148494 |||| || || || || ||||||||||||||||||||| || || || ||| Sbjct 7388 AGAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG 7329 Query 148495 GGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGA 148554 | |||||||| || ||| || || | || || | || || || || Sbjct 7328 GAGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGA 7269 Query 148555 GCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTC-GCT- 148612 | ||| ||| ||| || |||||| || ||| |||| |||| | | ||| | | Sbjct 7268 GGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTT---CAGCTCACGAGCCTCAGGTG 7212 Query 148613 -TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAA 148671 ||| | ||||| || || || || || ||||| || ||||| ||||||||||||| Sbjct 7211 ACTCGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAA 7152 Query 148672 TGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCG 148730 | || ||||| |||||| ||| || ||| || | |||||||||||| ||| Sbjct 7151 TAGGACGGTGGCGCATGTTGCTCTTGCGGGC-CTCCGGAACAGGATAGTGGTTGATATCG 7093 Query 148731 ATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAA---A 148787 |||||||||| || ||||| || || |||| || | | ||||||| | || | Sbjct 7092 ATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCATGCAGCAACTGGAAGTTA 7033 Query 148788 TCG---TACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACG 148844 | | | || || | ||| | | | || ||||||||| || || ||||| || Sbjct 7032 TAGCGCTCATTCTCGTAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACA 6973 Query 148845 GCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATT---GCTGCATTTG 148901 || |||||| || || ||||| | |||||| | ||| || || ||||| || Sbjct 6972 GCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATG 6913 Query 148902 ATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG-TCCTTGTACAGCATGTA 148960 | ||| | |||||| || |||||||||| |||| || | |||||||||| |||| | Sbjct 6912 GT---GCCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-GCGTGATCCTTGTACAACATGAA 6857 Query 148961 CGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGGTCCTGCGCGCGC 149018 || ||| || || || | || | ||| | | | || | |||||| | Sbjct 6856 GGGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCA--GAGCTTCTGCGCCTTC 6799 Query 149019 ACTTGCTGCTCGTAGCGACCCTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCT 149076 | || | | ||||||||| ||||||| | ||| | ||| ||||||| ||| Sbjct 6798 AGGGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGC--CTCGAACTCCT 6741 Query 149077 CGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGT 149136 |||||||||| ||| | || |||||||||| || |||||||| || | ||| |||||| Sbjct 6740 CGCCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGT 6681 Query 149137 CCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCG 149196 | | || |||||||| || ||||| || | |||||| || | |||||| || | Sbjct 6680 TCTTCTCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAG 6621 Query 149197 CCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGT 149256 | | ||||| || ||| ||||||| ||| | ||| | || |||| Sbjct 6620 CACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGT 6561 Query 149257 GCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGT 149313 |||| ||||| | ||| | || | || || |||| ||||| ||||| ||||||| Sbjct 6560 GCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGT 6501 Query 149314 GGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAG 149373 || | ||||||| || || || | |||||| |||||| ||| |||||||| | Sbjct 6500 ATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGG 6441 Query 149374 T-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCC- 149431 | ||| ||| |||| || || | ||| ||||||| || ||||| || Sbjct 6440 TGCCAGC-GATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCA 6382 Query 149432 GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGT 149490 ||| | ||| ||||| || || ||| | || || ||||||||||| ||||||| Sbjct 6381 GCCAT-CTTGGAGATCATGGCACAGGTCTTC-AGGGTATCATAGATGCCCTCAATGCTGT 6324 Query 149491 CGCGCTTCATGGTCAGC-AGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCG 149549 | |||||| |||| | || |||||||| ||| |||| | |||||||||| | Sbjct 6323 CCTCCTTCAT-GTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTG 6265 Query 149550 AACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGC 149609 |||| || || |||||||| || | || | | ||| | ||| | ||| || Sbjct 6264 AACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGA 6205 Query 149610 ACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGT 149669 || | || |||| || || |||||| | ||||| ||||||||||| ||||| || Sbjct 6204 ACCCTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGC 6145 Query 149670 CGCTCCGCCACTTT 149683 ||||| | ||||| Sbjct 6144 CGCTCGACGACTTT 6131 >seq2574 Length=14985 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| ||| |||| || ||||||||||| |||||||| || |||||| Sbjct 36 TCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTG 95 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || || | |||| | Sbjct 96 TCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATG 155 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || || || ||||| |||||||| Sbjct 156 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 190 >seq1214 Length=170273 Score = 118 bits (130), Expect = 1e-21 Identities = 148/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || ||||| ||| | || ||| |||||||||||||||| Sbjct 100690 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT--ACGGCCGTCCTCGAGCTGCTTG 100747 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||| ||||| || || || || |||||||| |||||| | Sbjct 100748 CCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCC 100807 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||||| | |||||| || | ||||| || ||||| || || Sbjct 100808 TTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGG 100867 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||||||| Sbjct 100868 GTCTTGACGAAGATCTGCATG 100888 >seq373 Length=59380 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| || || ||| || || || || |||||||||| Sbjct 238 GTCGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCG--TCTTCCAGCTGCTTGC 181 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 ||||| | || || ||||||||||| || || || || |||||||| ||||| || Sbjct 180 CCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTGGCCT 121 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||| || | | ||||| |||| ||||| || ||||| ||||| | Sbjct 120 TCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCTTGCCCGTCAGGG 61 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 60 TCTTGACGAAGATTTGCAT 42 >seq6049 Length=106314 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || | ||||| || || |||||||| || |||||| Sbjct 70185 TCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGGATACCCTCCTTG 70244 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||||| | |||||| || | ||||| Sbjct 70245 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 70304 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651 || ||||| ||||| || || ||||| Sbjct 70305 GTCTTGCCCGTCAGGGTCTTCACGAA 70330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483382035694600