Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq638 367 1e-96
seq2574 118 1e-21
seq1214 118 1e-21
seq373 102 8e-17
seq6049 93.3 4e-14
>seq638
Length=259535
Score = 367 bits (406), Expect = 1e-96
Identities = 971/1454 (67%), Gaps = 44/1454 (3%)
Strand=Plus/Minus
Query 148258 GATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACG 148317
|||| || || || |||||||| ||||||||||| ||| |||| | |||| ||| | |
Sbjct 7568 GATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGG 7509
Query 148318 GTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTA 148377
| ||||| ||||||||||||||| ||||||| |||| || ||||||||| ||| |
Sbjct 7508 GCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCA 7449
Query 148378 CCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCC 148437
|| || |||||| | |||| | | || || ||| ||||| || |||||||||
Sbjct 7448 TCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCC 7389
Query 148438 AGAGCGGCGACGG--TGTCA-CGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGG 148494
|||| || || || || ||||||||||||||||||||| || || || |||
Sbjct 7388 AGAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG 7329
Query 148495 GGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGA 148554
| |||||||| || ||| || || | || || | || || || ||
Sbjct 7328 GAGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGA 7269
Query 148555 GCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTC-GCT- 148612
| ||| ||| ||| || |||||| || ||| |||| |||| | | ||| | |
Sbjct 7268 GGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTT---CAGCTCACGAGCCTCAGGTG 7212
Query 148613 -TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAA 148671
||| | ||||| || || || || || ||||| || ||||| |||||||||||||
Sbjct 7211 ACTCGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAA 7152
Query 148672 TGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCG 148730
| || ||||| |||||| ||| || ||| || | |||||||||||| |||
Sbjct 7151 TAGGACGGTGGCGCATGTTGCTCTTGCGGGC-CTCCGGAACAGGATAGTGGTTGATATCG 7093
Query 148731 ATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAA---A 148787
|||||||||| || ||||| || || |||| || | | ||||||| | || |
Sbjct 7092 ATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCATGCAGCAACTGGAAGTTA 7033
Query 148788 TCG---TACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACG 148844
| | | || || | ||| | | | || ||||||||| || || ||||| ||
Sbjct 7032 TAGCGCTCATTCTCGTAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACA 6973
Query 148845 GCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATT---GCTGCATTTG 148901
|| |||||| || || ||||| | |||||| | ||| || || ||||| ||
Sbjct 6972 GCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATG 6913
Query 148902 ATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCG-TCCTTGTACAGCATGTA 148960
| ||| | |||||| || |||||||||| |||| || | |||||||||| |||| |
Sbjct 6912 GT---GCCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-GCGTGATCCTTGTACAACATGAA 6857
Query 148961 CGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGGTCCTGCGCGCGC 149018
|| ||| || || || | || | ||| | | | || | |||||| |
Sbjct 6856 GGGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCA--GAGCTTCTGCGCCTTC 6799
Query 149019 ACTTGCTGCTCGTAGCGACCCTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCT 149076
| || | | ||||||||| ||||||| | ||| | ||| ||||||| |||
Sbjct 6798 AGGGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGC--CTCGAACTCCT 6741
Query 149077 CGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGT 149136
|||||||||| ||| | || |||||||||| || |||||||| || | ||| ||||||
Sbjct 6740 CGCCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGT 6681
Query 149137 CCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCG 149196
| | || |||||||| || ||||| || | |||||| || | |||||| || |
Sbjct 6680 TCTTCTCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAG 6621
Query 149197 CCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGT 149256
| | ||||| || ||| ||||||| ||| | ||| | || ||||
Sbjct 6620 CACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGT 6561
Query 149257 GCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGT 149313
|||| ||||| | ||| | || | || || |||| ||||| ||||| |||||||
Sbjct 6560 GCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGT 6501
Query 149314 GGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAG 149373
|| | ||||||| || || || | |||||| |||||| ||| |||||||| |
Sbjct 6500 ATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGG 6441
Query 149374 T-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCC- 149431
| ||| ||| |||| || || | ||| ||||||| || ||||| ||
Sbjct 6440 TGCCAGC-GATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCA 6382
Query 149432 GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGT 149490
||| | ||| ||||| || || ||| | || || ||||||||||| |||||||
Sbjct 6381 GCCAT-CTTGGAGATCATGGCACAGGTCTTC-AGGGTATCATAGATGCCCTCAATGCTGT 6324
Query 149491 CGCGCTTCATGGTCAGC-AGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCG 149549
| |||||| |||| | || |||||||| ||| |||| | |||||||||| |
Sbjct 6323 CCTCCTTCAT-GTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTG 6265
Query 149550 AACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGC 149609
|||| || || |||||||| || | || | | ||| | ||| | ||| ||
Sbjct 6264 AACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGA 6205
Query 149610 ACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGT 149669
|| | || |||| || || |||||| | ||||| ||||||||||| ||||| ||
Sbjct 6204 ACCCTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGC 6145
Query 149670 CGCTCCGCCACTTT 149683
||||| | |||||
Sbjct 6144 CGCTCGACGACTTT 6131
>seq2574
Length=14985
Score = 118 bits (130), Expect = 1e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||||||||||||||| ||| |||| || ||||||||||| |||||||| || ||||||
Sbjct 36 TCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTG 95
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||| | || ||| || || | |||| |
Sbjct 96 TCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATG 155
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || || || ||||| ||||||||
Sbjct 156 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 190
>seq1214
Length=170273
Score = 118 bits (130), Expect = 1e-21
Identities = 148/201 (74%), Gaps = 4/201 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520
||||||||| ||||| || ||||| ||| | || ||| ||||||||||||||||
Sbjct 100690 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT--ACGGCCGTCCTCGAGCTGCTTG 100747
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| | || || ||||| ||||| || || || || |||||||| |||||| |
Sbjct 100748 CCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGCC 100807
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| | || | ||||||| | |||||| || | ||||| || ||||| || ||
Sbjct 100808 TTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGG 100867
Query 133641 GTTTTTACGAAAATCTGCATG 133661
|| || ||||| |||||||||
Sbjct 100868 GTCTTGACGAAGATCTGCATG 100888
>seq373
Length=59380
Score = 102 bits (112), Expect = 8e-17
Identities = 143/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|| ||||| ||||| || ||||| || || ||| || || || || ||||||||||
Sbjct 238 GTCGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCG--TCTTCCAGCTGCTTGC 181
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
||||| | || || ||||||||||| || || || || |||||||| ||||| ||
Sbjct 180 CCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTGGCCT 121
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | ||| || | | ||||| |||| ||||| || ||||| ||||| |
Sbjct 120 TCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCTTGCCCGTCAGGG 61
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| || |||||
Sbjct 60 TCTTGACGAAGATTTGCAT 42
>seq6049
Length=106314
Score = 93.3 bits (102), Expect = 4e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| ||| | || | ||||| || || |||||||| || ||||||
Sbjct 70185 TCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGGATACCCTCCTTG 70244
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||||||| | |||||| || | |||||
Sbjct 70245 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 70304
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAA 133651
|| ||||| ||||| || || |||||
Sbjct 70305 GTCTTGCCCGTCAGGGTCTTCACGAA 70330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483382035694600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |