Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq638 219 4e-52 >seq638 Length=259535 Score = 219 bits (242), Expect = 4e-52 Identities = 960/1501 (64%), Gaps = 30/1501 (2%) Strand=Plus/Minus Query 146891 GATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAG 146950 ||||||| ||||| |||||||| || ||||| || | |||| | ||| || | | Sbjct 7568 GATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGG 7509 Query 146951 GCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCA 147010 ||||||| |||| || ||||| | || || | || | || || |||||| ||||| Sbjct 7508 GCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCA 7449 Query 147011 CCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCC 147070 |||||| || || | ||||| | ||| ||| ||||||| | | |||||||| Sbjct 7448 TCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCC 7389 Query 147071 ACATCGACGAGGGCGTCAC---GTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGG 147127 | | |||||| | || |||||||||||||||||| || | || | | ||| Sbjct 7388 AGAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG 7329 Query 147128 GACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGA 147187 || || || | | | |||| || || || || | ||||| ||| || Sbjct 7328 GAGATCCCTCGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGA 7269 Query 147188 GCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCT 147247 | || | | ||| ||||| ||| ||| || ||||| || | || || || Sbjct 7268 GGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACT 7209 Query 147248 CGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAG 147307 || ||||||| || || || || |||||||||| |||||||| || ||||| |||| Sbjct 7208 CGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAG 7149 Query 147308 GTCGATGCTTTTCGTTGCTGCGCTT-CGCGCT--CGCTATGGGATAGTGGTTGCGATCAA 147364 | || || |||||| ||| || || || | |||||||||||| ||| | Sbjct 7148 GACGGTGGCGCATGTTGCT---CTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGA 7092 Query 147365 TAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCAT 147424 | |||||||| ||||| || || || || | || | | | || || ||| | || Sbjct 7091 TGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCATGCAGCAACTGGAAGTTAT 7032 Query 147425 AAGTCCCGTCTTCG-ACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACG 147483 | | | | ||| | || ||| | || || ||||||||||||||| |||||||| Sbjct 7031 AGCGCTCATTCTCGTAGTCG-ACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACA 6973 Query 147484 GCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATG 147543 || ||| || | | |||| | ||| || | ||| |||||| || ||| Sbjct 6972 GCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATG 6913 Query 147544 ACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCG-TCTTTGAAGAGCATGTACGG 147602 || | || | ||| ||||| || || ||| || | || ||| | | |||| | || Sbjct 6912 GTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGG-CGTGATCCTTGTACAACATGAAGGG 6854 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCAC 147659 ||| |||||| ||| | || | ||| | ||| || | |||||| || Sbjct 6853 GTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGC---TTCTGCGCCTTCAG 6797 Query 147660 CCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCC 147719 || | ||| |||||| |||||| |||||||| ||| ||||| ||||| Sbjct 6796 GGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCC 6737 Query 147720 GTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGC 147779 |||||| |||||||||||||| |||| | || |||||||| | ||| | ||| | Sbjct 6736 GTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTT 6677 Query 147780 GTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTT 147839 | || || ||| || |||||||| | ||| || || | || || || || Sbjct 6676 CTCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACG 6617 Query 147840 GCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCA-CGCTATAGATGTCGGCGTGCC 147898 | || || || ||| || | || | | | | ||| || ||||||| Sbjct 6616 GACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGA-AGACATCAGCGTGCC 6558 Query 147899 AGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGC 147955 | || || | ||||| ||| | ||||| ||||| || ||||| ||||| | | Sbjct 6557 ATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATC 6498 Query 147956 GCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGG 148015 | | ||||||| || || |||| ||| || | ||| | | |||||||||||| Sbjct 6497 GGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGC 6438 Query 148016 AATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GCCG 148074 | ||| | | |||| ||| || | ||| ||||| | |||||||| || ||| Sbjct 6437 CAGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCA 6378 Query 148075 TACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 | ||| || || || ||| | | || || |||||||| || |||||||| | Sbjct 6377 T-CTTGGAGAT--CATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCT 6321 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192 || | | ||| | || ||||| ||| |||| |||| || || ||| | Sbjct 6320 CCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACA 6261 Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGT 148252 | || || |||||| || || || || | ||| | || ||||||| | | Sbjct 6260 GCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCC 6201 Query 148253 CTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTT 148312 ||||||| ||| || ||||| | ||||| ||||| |||||||||||||| || | Sbjct 6200 TCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCT 6141 Query 148313 CGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGT 148372 || | |||| | ||||| ||||| ||||| | |||||||| ||| | ||||||| Sbjct 6140 CGACGACTTTACCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGT 6081 Query 148373 A 148373 | Sbjct 6080 A 6080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476572981739400