Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2112 143 3e-29 >seq2112 Length=5501 Score = 143 bits (158), Expect = 3e-29 Identities = 276/402 (69%), Gaps = 4/402 (1%) Strand=Plus/Minus Query 147105 CACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 |||||| ||||| ||| | |||||||||||||||||||||||| ||||||| || Sbjct 3941 CACGTAGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGG 3883 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||| || | | | ||| | | | |||||| || | || | | | Sbjct 3882 GGTTCCACGCGCTCAGGATGATCCGGCGGTCGTGCGGGTTCGTCCGCAGCTTGTGCACGA 3823 Query 147224 CCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGC-AGTCCACGTACCTG 147282 || | ||||||||| ||||||||||| |||||| | | ||| ||| |||||| | Sbjct 3822 CCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCG-CGCGCGCGTCGACGTACTCG 3764 Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 || || ||||||| ||||||||| |||||||| || || |||||||| || | |||| Sbjct 3763 GCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTGC 3704 Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402 | | |||| | | | || ||| || | || |||| | |||||||||| || ||| Sbjct 3703 GCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCC 3644 Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAA 147462 | ||| |||| | || ||| | |||| | ||||||||| ||||| ||| Sbjct 3643 TGCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGGCCAGC 3584 Query 147463 ACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 147504 ||| ||| || || | |||||| || ||||| ||| || Sbjct 3583 ACCGCCCGGTGGAACACGCGCTTGGTCGTGAGCAGCGGGTAC 3542 Score = 129 bits (142), Expect = 7e-25 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985 |||||||||| | ||||||||||||||| |||| | |||| | | ||||| Sbjct 4204 TCCACGTGGTCCACGTAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGACG 4145 Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045 ||| || |||||| || ||||||| || ||||||| ||||||||| |||||||| || Sbjct 4144 AGGTCGCACACGTGCGCGACCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGC 4085 Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 || || ||||||||||| | |||| ||||||||||||||| Sbjct 4084 ACGCCGAGGCCCATGTCGCAGGACCGCTGGTACAGCTGGCA 4044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583441211556000