Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq638 168 1e-35 seq4787 147 3e-29 seq3478 131 2e-24 >seq638 Length=259535 Score = 168 bits (186), Expect = 1e-35 Identities = 272/393 (69%), Gaps = 15/393 (4%) Strand=Plus/Plus Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCC 259849 |||||||||||||| ||| | ||||| ||||||||||| ||||| | ||| | | Sbjct 6134 GTCGTCGAGCGGCCACAGCACATGCTGATGCGTGTCGCTGTTGGCATCTGGGGG---GAC 6190 Query 259850 GACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTG 259909 || |||| | | || ||| |||||| | |||||| | |||| Sbjct 6191 AACATCGAGAGGGTTCTTGAG------------ACCTACAACTACATGTCCAACAAGTTC 6238 Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969 ||||| ||| |||| ||||| || |||||||||||||| | ||||| |||||| Sbjct 6239 TTCACACACGCGTCGCCAACGCTGTTCAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCG 6298 Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||| || | |||||||||| || || |||||||||||||| || || ||| Sbjct 6299 TGCTTCCTCGTTGACATGAAGGAGGACAGCATTGAGGGCATCTATGATACCCTGAAGACC 6358 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089 || || | ||||||||| ||| || ||||| ||| | || ||| | || ||| Sbjct 6359 TGTGCCATGATCTCCAAGATGGCTGGAGGCATTGGTCTCAACGTCCACCGCATCCGTGCC 6418 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149 | ||| ||||| | || |||||||||||| |||||| ||| | | || ||| | || Sbjct 6419 ACCGGCTCCTACATCGCTGGCACCAACGGCACGTCCAATGGCATCATCCCTATGTTGCGT 6478 Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || || ||| |||| || || |||||||| ||| Sbjct 6479 GTCTTCAACAACACTGCCCGATACGTCGATCAG 6511 Score = 116 bits (128), Expect = 5e-20 Identities = 356/542 (66%), Gaps = 20/542 (4%) Strand=Plus/Plus Query 262878 CTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCT 262937 ||||||||||||||| || ||| | | ||||| || | |||||| ||| | Sbjct 7387 CTGGGACTGGGACGCCTTGAAGGCCAAGATCAAGCAGCACGGTGTCCGCAACAGCTTGTT 7446 Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997 |||||| ||||||||| ||| |||| ||||||||||||||||||| |||| || || Sbjct 7447 GATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCTGGGCAACAACGAGTGCTTTGA 7506 Query 262998 GGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057 | | || ||||||||| ||||||||||||| | ||||| || || ||||| Sbjct 7507 GCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGCTGGCGAGTTCCAAGTTGTCAA 7566 Query 263058 CCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCG 263117 | ||| ||||| ||||| | | || |||||| | ||| | |||| Sbjct 7567 TCCATGGCTGCTCAAGGATCTGGTGCAGTGTGGTCTGTGGTCTGAGGACCTGAAGAACCG 7626 Query 263118 GCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATCT 263177 |||| || | | ||||| | ||| || || || | | || || | Sbjct 7627 CATCATCGCTGAGGATGGCTCTATCCAGAATATT--CG--CAGCA--TCCCAGATGACAT 7680 Query 263178 CAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATGGC 263234 |||||| |||| ||||||||| |||||| | | | | |||||| | | ||||| Sbjct 7681 CAAGGCCCTCTACAAGACCGTCTGGGAGAT---CTCGCAGAGGACCATCGTGCAGATGGC 7737 Query 263235 GGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACC- 263293 ||||| || | ||| |||||||| ||||||||| ||| | || | || | Sbjct 7738 TGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATACACATGCGTGAGCC 7797 Query 263294 --CGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGAC 263351 | | || | || ||||| |||||| | | ||| | || |||||||| Sbjct 7798 TTCTATGGGCAAG---ATCACTAGCATGCACTTCACCGGTTGGAAGCTGGGTCTCAAGAC 7854 Query 263352 TGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCC-ATTCAATTCACCGTCGATC 263410 |||||||||||| || ||||| | | | || | || |||| ||||| ||||| ||||| | Sbjct 7855 TGGCATGTACTACCTCCGCACACAGGCAGC-GGCAGCGCCGATTCAGTTCACAGTCGACC 7913 Query 263411 AG 263412 || Sbjct 7914 AG 7915 >seq4787 Length=155596 Score = 147 bits (162), Expect = 3e-29 Identities = 307/455 (67%), Gaps = 2/455 (0%) Strand=Plus/Plus Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCC 332935 ||||| || ||||| ||| ||||| | |||||||| | | ||| ||| || || Sbjct 71656 CGCAGTATCGCACACCGGGACTGCAATGGCTCGATGATCTTGTTGGACTGGTTACATGCG 71715 Query 332936 AGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCC 332995 | ||| || ||||| ||||| | | | ||||| ||| ||| || ||||| || || Sbjct 71716 AAGGCGAAGCGCGTGGTATTCGAGTAGATCTCCATTGTCCGCCGCAGTGCCTGCTGCGC- 71774 Query 332996 GCCGG-CGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054 |||| ||| | || ||||||||| || ||||||| |||||||||||| || |||||| Sbjct 71775 GCCGCTCGTCATGCTGTCGGCCTCATCAAGGATGACGATCTTGTGGCGGCCCGCCGGCAG 71834 Query 333055 ATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTC 333114 ||| | ||| ||| |||||| |||||||||||||| | |||||||| Sbjct 71835 GGTGACCTTCTTCTGCGCGAAACCCTTGATGCGGTTGCGCACGACGTCGATTCCGCGCTC 71894 Query 333115 GTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGC 333174 || || || || || ||||| || ||||| | | || |||| | || |||||| Sbjct 71895 ATCTGAGGCATTCAGCTCGAGGACCGCCTCCTTGTACGCATCACCGAGCAGCTGGCGCGC 71954 Query 333175 CAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGG 333234 ||||||| | || |||||||| | || ||| || | | | || || ||| Sbjct 71955 CAGGCACAGCACCGAGGTCGTCTTGCCGATACCAGGCATCCCGGAGATAATGACGTGGGG 72014 Query 333235 CATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAAT 333294 ||| |||||||| ||| | |||||| | | || | |||||||||| || Sbjct 72015 CATATTGCCGTCCTTGGCGATGATCTTGAGCCGCTCGATGGTCTCGACGTTGCCGACTAT 72074 Query 333295 GTCGTCGAGCACCATTGGGCGGTACTTTTCGATCC 333329 || ||||| | | |||||||| || |||| || Sbjct 72075 ATCATCGAGGAAGACGGGGCGGTATTTCTCGACCC 72109 >seq3478 Length=17986 Score = 131 bits (144), Expect = 2e-24 Identities = 234/336 (70%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||| |||||| ||||| |||||||| |||||| | |||| Sbjct 7800 GATTTGGCAAATGTAC-AAGAAGCACGAGGCGTCCTTCTGGACCGCTGAGGAGATTGACC 7858 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 | ||| | | ||||| | ||| ||| |||||| | |||||| Sbjct 7859 TGTCTAAGGACCTGCACGACTGGAACAACCGTTTGACCGATGACGAGAAATACTTCATCT 7918 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||| |||||||||| ||| ||||| || |||||||| ||| ||| || || Sbjct 7919 CCCACATCCTCGCCTTCTTT-GCCGCTTCGGACGGCATCGTTAACGAAAACTTGATCGAG 7977 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | |||||||| | || ||||| |||| || ||||| ||||||| | Sbjct 7978 CGCTTCAGTGCTGAGGTCCAGATTCCTGAGGCCCGTTGTTTCTACGGCTTCCAGACCATG 8037 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || || ||||| |||||||| || || || ||||||| || Sbjct 8038 ATGGAGAACATCCACTCCGAGACTTACTCTCTCCTGATTGATACATATATCAAGGAGCCT 8097 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106 | | || | ||| ||||||| |||||| || || Sbjct 8098 GCCCAG-CGCACCTACCTCTTCAACGCCATTGAGAC 8132 Score = 93.3 bits (102), Expect = 6e-13 Identities = 179/259 (69%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| ||| || || | || ||||| ||||| | | |||| | |||| || Sbjct 8467 ATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCTGACCGAGGCCTTGCCCTGTGCC 8526 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||||||||| |||| | | ||| |||||||| ||||| ||||||||||| | Sbjct 8527 CTGCTCGGCATGAATGCCAACT-TGATGAAGCAGTACATCGAATTC-GTCGCCGACCGTC 8584 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | |||| || |||||| || ||||| |||| | | | ||||| ||| | ||| Sbjct 8585 TCCTCGTCGCTCTCGGCAACG-AGAAGATCTACAAGTCTACTAACCCTTTCGACTTCATG 8643 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| ||||| || | || ||||||||||| |||||| || | ||| || ||| Sbjct 8644 GAGAACATCTCCCTTGGCGGGAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 8703 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 8704 AAGGCTGGTGTCATGGCCA 8722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177192461459230