Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq638 168 1e-35
seq4787 147 3e-29
seq3478 131 2e-24
>seq638
Length=259535
Score = 168 bits (186), Expect = 1e-35
Identities = 272/393 (69%), Gaps = 15/393 (4%)
Strand=Plus/Plus
Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCC 259849
|||||||||||||| ||| | ||||| ||||||||||| ||||| | ||| | |
Sbjct 6134 GTCGTCGAGCGGCCACAGCACATGCTGATGCGTGTCGCTGTTGGCATCTGGGGG---GAC 6190
Query 259850 GACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTG 259909
|| |||| | | || ||| |||||| | |||||| | ||||
Sbjct 6191 AACATCGAGAGGGTTCTTGAG------------ACCTACAACTACATGTCCAACAAGTTC 6238
Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969
||||| ||| |||| ||||| || |||||||||||||| | ||||| ||||||
Sbjct 6239 TTCACACACGCGTCGCCAACGCTGTTCAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCG 6298
Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029
||||| || | |||||||||| || || |||||||||||||| || || |||
Sbjct 6299 TGCTTCCTCGTTGACATGAAGGAGGACAGCATTGAGGGCATCTATGATACCCTGAAGACC 6358
Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089
|| || | ||||||||| ||| || ||||| ||| | || ||| | || |||
Sbjct 6359 TGTGCCATGATCTCCAAGATGGCTGGAGGCATTGGTCTCAACGTCCACCGCATCCGTGCC 6418
Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149
| ||| ||||| | || |||||||||||| |||||| ||| | | || ||| | ||
Sbjct 6419 ACCGGCTCCTACATCGCTGGCACCAACGGCACGTCCAATGGCATCATCCCTATGTTGCGT 6478
Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|| || ||| |||| || || |||||||| |||
Sbjct 6479 GTCTTCAACAACACTGCCCGATACGTCGATCAG 6511
Score = 116 bits (128), Expect = 5e-20
Identities = 356/542 (66%), Gaps = 20/542 (4%)
Strand=Plus/Plus
Query 262878 CTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCT 262937
||||||||||||||| || ||| | | ||||| || | |||||| ||| |
Sbjct 7387 CTGGGACTGGGACGCCTTGAAGGCCAAGATCAAGCAGCACGGTGTCCGCAACAGCTTGTT 7446
Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997
|||||| ||||||||| ||| |||| ||||||||||||||||||| |||| || ||
Sbjct 7447 GATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCTGGGCAACAACGAGTGCTTTGA 7506
Query 262998 GGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057
| | || ||||||||| ||||||||||||| | ||||| || || |||||
Sbjct 7507 GCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGCTGGCGAGTTCCAAGTTGTCAA 7566
Query 263058 CCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCG 263117
| ||| ||||| ||||| | | || |||||| | ||| | ||||
Sbjct 7567 TCCATGGCTGCTCAAGGATCTGGTGCAGTGTGGTCTGTGGTCTGAGGACCTGAAGAACCG 7626
Query 263118 GCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATCT 263177
|||| || | | ||||| | ||| || || || | | || || |
Sbjct 7627 CATCATCGCTGAGGATGGCTCTATCCAGAATATT--CG--CAGCA--TCCCAGATGACAT 7680
Query 263178 CAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATGGC 263234
|||||| |||| ||||||||| |||||| | | | | |||||| | | |||||
Sbjct 7681 CAAGGCCCTCTACAAGACCGTCTGGGAGAT---CTCGCAGAGGACCATCGTGCAGATGGC 7737
Query 263235 GGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACC- 263293
||||| || | ||| |||||||| ||||||||| ||| | || | || |
Sbjct 7738 TGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATACACATGCGTGAGCC 7797
Query 263294 --CGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGAC 263351
| | || | || ||||| |||||| | | ||| | || ||||||||
Sbjct 7798 TTCTATGGGCAAG---ATCACTAGCATGCACTTCACCGGTTGGAAGCTGGGTCTCAAGAC 7854
Query 263352 TGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCC-ATTCAATTCACCGTCGATC 263410
|||||||||||| || ||||| | | | || | || |||| ||||| ||||| ||||| |
Sbjct 7855 TGGCATGTACTACCTCCGCACACAGGCAGC-GGCAGCGCCGATTCAGTTCACAGTCGACC 7913
Query 263411 AG 263412
||
Sbjct 7914 AG 7915
>seq4787
Length=155596
Score = 147 bits (162), Expect = 3e-29
Identities = 307/455 (67%), Gaps = 2/455 (0%)
Strand=Plus/Plus
Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGGCC 332935
||||| || ||||| ||| ||||| | |||||||| | | ||| ||| || ||
Sbjct 71656 CGCAGTATCGCACACCGGGACTGCAATGGCTCGATGATCTTGTTGGACTGGTTACATGCG 71715
Query 332936 AGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGCC 332995
| ||| || ||||| ||||| | | | ||||| ||| ||| || ||||| || ||
Sbjct 71716 AAGGCGAAGCGCGTGGTATTCGAGTAGATCTCCATTGTCCGCCGCAGTGCCTGCTGCGC- 71774
Query 332996 GCCGG-CGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054
|||| ||| | || ||||||||| || ||||||| |||||||||||| || ||||||
Sbjct 71775 GCCGCTCGTCATGCTGTCGGCCTCATCAAGGATGACGATCTTGTGGCGGCCCGCCGGCAG 71834
Query 333055 ATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTC 333114
||| | ||| ||| |||||| |||||||||||||| | ||||||||
Sbjct 71835 GGTGACCTTCTTCTGCGCGAAACCCTTGATGCGGTTGCGCACGACGTCGATTCCGCGCTC 71894
Query 333115 GTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGC 333174
|| || || || || ||||| || ||||| | | || |||| | || ||||||
Sbjct 71895 ATCTGAGGCATTCAGCTCGAGGACCGCCTCCTTGTACGCATCACCGAGCAGCTGGCGCGC 71954
Query 333175 CAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGG 333234
||||||| | || |||||||| | || ||| || | | | || || |||
Sbjct 71955 CAGGCACAGCACCGAGGTCGTCTTGCCGATACCAGGCATCCCGGAGATAATGACGTGGGG 72014
Query 333235 CATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAAT 333294
||| |||||||| ||| | |||||| | | || | |||||||||| ||
Sbjct 72015 CATATTGCCGTCCTTGGCGATGATCTTGAGCCGCTCGATGGTCTCGACGTTGCCGACTAT 72074
Query 333295 GTCGTCGAGCACCATTGGGCGGTACTTTTCGATCC 333329
|| ||||| | | |||||||| || |||| ||
Sbjct 72075 ATCATCGAGGAAGACGGGGCGGTATTTCTCGACCC 72109
>seq3478
Length=17986
Score = 131 bits (144), Expect = 2e-24
Identities = 234/336 (70%), Gaps = 7/336 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||| |||||| ||||| |||||||| |||||| | ||||
Sbjct 7800 GATTTGGCAAATGTAC-AAGAAGCACGAGGCGTCCTTCTGGACCGCTGAGGAGATTGACC 7858
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891
| ||| | | ||||| | ||| ||| |||||| | ||||||
Sbjct 7859 TGTCTAAGGACCTGCACGACTGGAACAACCGTTTGACCGATGACGAGAAATACTTCATCT 7918
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| |||||||||| ||| ||||| || |||||||| ||| ||| || ||
Sbjct 7919 CCCACATCCTCGCCTTCTTT-GCCGCTTCGGACGGCATCGTTAACGAAAACTTGATCGAG 7977
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | |||||||| | || ||||| |||| || ||||| ||||||| |
Sbjct 7978 CGCTTCAGTGCTGAGGTCCAGATTCCTGAGGCCCGTTGTTTCTACGGCTTCCAGACCATG 8037
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || ||||||||||| || || ||||| |||||||| || || || ||||||| ||
Sbjct 8038 ATGGAGAACATCCACTCCGAGACTTACTCTCTCCTGATTGATACATATATCAAGGAGCCT 8097
Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACAC 1456106
| | || | ||| ||||||| |||||| || ||
Sbjct 8098 GCCCAG-CGCACCTACCTCTTCAACGCCATTGAGAC 8132
Score = 93.3 bits (102), Expect = 6e-13
Identities = 179/259 (69%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
||||| ||| || || | || ||||| ||||| | | |||| | |||| ||
Sbjct 8467 ATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCTGACCGAGGCCTTGCCCTGTGCC 8526
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| |||||||||| |||| | | ||| |||||||| ||||| ||||||||||| |
Sbjct 8527 CTGCTCGGCATGAATGCCAACT-TGATGAAGCAGTACATCGAATTC-GTCGCCGACCGTC 8584
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| |||| || |||||| || ||||| |||| | | | ||||| ||| | |||
Sbjct 8585 TCCTCGTCGCTCTCGGCAACG-AGAAGATCTACAAGTCTACTAACCCTTTCGACTTCATG 8643
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761
||| ||||| || | || ||||||||||| |||||| || | ||| || |||
Sbjct 8644 GAGAACATCTCCCTTGGCGGGAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 8703
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
||||| || |||| ||||
Sbjct 8704 AAGGCTGGTGTCATGGCCA 8722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177192461459230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |