Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3478 118 3e-21 seq638 91.5 5e-13 >seq3478 Length=17986 Score = 118 bits (130), Expect = 3e-21 Identities = 120/155 (77%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || || || ||||||| |||||||| | || || || ||| ||||| || ||| Sbjct 8261 AGCGCCTTGTTGCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGC-GCTTTCGCTTCC 8319 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| |||| |||||||| || |||| || |||||||| |||||||| ||| Sbjct 8320 ATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATC 8379 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861 ||| ||||||||| |||| ||||||||||| Sbjct 8380 TCTCGTGACGAGGGTCTGCACACTGACTTCGCCTG 8414 >seq638 Length=259535 Score = 91.5 bits (100), Expect = 5e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 254972 GGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGC 255031 ||||| || || ||| | ||||| ||||||||| || || ||||||||||| || ||| Sbjct 6458 GGCATCATCCCTATGTTGCGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGGTGGC 6517 Query 255032 GGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 || ||||| || || || |||||||||||||||| |||||||| || Sbjct 6518 AATAAGCGCCCCGGTGCTTTTGCCATCTACCTGGAGCCATGGCACGCTGA 6567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588205451189675