Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq638 251 9e-62
>seq638
Length=259535
Score = 251 bits (278), Expect = 9e-62
Identities = 1141/1779 (64%), Gaps = 46/1779 (3%)
Strand=Plus/Minus
Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390
|||||||||| || || |||| || ||||| |||||||| || |||||||| |
Sbjct 7904 TGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 7845
Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449
| | ||||| || | ||||| || || |||| ||| | || || | ||||
Sbjct 7844 CCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCATG 7786
Query 110450 AAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAA 110507
| ||||| ||| |||| |||| |||||| || || | || ||||| | |
Sbjct 7785 TGTATGTTCAGCGACTGGGACT--GGTCGATGAAGGCACCACGATCGGCAGCCATCTGCA 7728
Query 110508 TGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGA 110567
|| | || | || ||||| || || ||||| |||||| ||||||||||
Sbjct 7727 CGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGA 7668
Query 110568 TATCTGAGA-TATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTG 110626
| ||| || |||||||||| || || || | | ||| | | ||||| ||||
Sbjct 7667 TG-CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCA 7609
Query 110627 GACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTG--TTGACAATGACAAACT 110684
||||| |||||| || | || || |||| || | || ||||||| ||||
Sbjct 7608 GACCACAGACCACACTGCACCAGATCCTTGAGCAGC--CATGGATTGACAACTTGGAACT 7551
Query 110685 CACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTAT 110744
| || ||||| | | | | |||||||| | ||| || || |||||||| || || |
Sbjct 7550 CGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGT 7491
Query 110745 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 110804
| |||| ||| || | || ||||| || ||||| || |||||||| | ||||| || |
Sbjct 7490 TGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGA 7431
Query 110805 GACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTC 110862
||| | || |||||| |||| | | |||||||| || || | || ||
Sbjct 7430 CACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGA-GATCAGAGGGCTTG 7372
Query 110863 ACCTTC--CCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTT 110920
|| || ||||||||| |||| || | || ||||| ||||||| ||||| | | |
Sbjct 7371 ACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGAT 7312
Query 110921 TCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATG 110980
|||| || | | | || | ||||| || |||| ||||| || |||
Sbjct 7311 GAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATG 7252
Query 110981 GTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGC 111035
|| || ||||| | |||| ||| || ||| ||| || || |||| ||
Sbjct 7251 GTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGG 7192
Query 111036 GGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095
| || ||| |||| || ||||| || || |||| |||||||| | ||| ||||
Sbjct 7191 GCCAAGAAAG-----CATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCA 7137
Query 111096 TATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155
| || ||| || || | ||| ||||| || | || |||| ||| || |
Sbjct 7136 TGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGT 7077
Query 111156 TTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG-AGTCTCT 111214
| || | || |||| |||||| || | | | | | | || | ||||
Sbjct 7076 TGCGAACGACGACCTGGGTGACTTCATGCAGCAACTGGAAGTTATA-GCGCTCATTCTCG 7018
Query 111215 TCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTA 111274
| | ||| ||| ||| |||||||| || |||| ||||| ||||| |||||| |
Sbjct 7017 TAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCATCAGGA 6958
Query 111275 TCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 111334
| | ||||| | || || || || | |||||| || ||| || || | |||||
Sbjct 6957 GCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTTC 6898
Query 111335 TGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 111394
||||| ||||| |||| ||||||||| | |||| |||| | || ||||| ||
Sbjct 6897 TGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTT 6838
Query 111395 TGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CGT 111451
|| | | ||| || || | ||| | | || ||| || || | | || |||| ||
Sbjct 6837 TGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTT---CAGGGTCTTTTGGCCGCGA 6781
Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA 111511
||||| ||||||||| ||| || || || |||||||| || ||||| ||
Sbjct 6780 CCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGG 6721
Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571
|| || || || || || | |||| ||| | || | ||| || |||||||||
Sbjct 6720 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATG 6661
Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACC 111630
|| || || || ||||| |||| ||||| || | | ||| || ||||||| | ||
Sbjct 6660 AAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGA-CCTCTTCCTTTCC 6602
Query 111631 TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGAC 111690
||||| || | || |||||||| | || ||| |||||||||||||| || ||||
Sbjct 6601 GTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGAT 6542
Query 111691 TGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747
|| | || || || | ||| | |||| || || || || ||| ||| ||
Sbjct 6541 GGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAA 6482
Query 111748 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGAT 111805
|| || | ||| || || || |||| || || || || || ||| || |||
Sbjct 6481 GACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAG-- 6424
Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865
|||| | | |||| || | ||||| || |||||| ||| |||||
Sbjct 6423 CCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATG 6364
Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925
||||| | | || || ||||||| || | || ||||||||| || | | |||
Sbjct 6363 GCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGG 6304
Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985
||||| |||| ||||| || || || |||||||| || ||||| | |||||
Sbjct 6303 AAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGT 6244
Query 111986 ATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 112044
|||| | || | | |||||| | || ||| ||||| | || || |||| |||||
Sbjct 6243 GTGAAGA-ACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCC 6185
Query 112045 GTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|||||| | ||||| ||||| | ||||| ||||||
Sbjct 6184 CCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGG 6146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627981639684000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |