Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq638 251 9e-62 >seq638 Length=259535 Score = 251 bits (278), Expect = 9e-62 Identities = 1141/1779 (64%), Gaps = 46/1779 (3%) Strand=Plus/Minus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 |||||||||| || || |||| || ||||| |||||||| || |||||||| | Sbjct 7904 TGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 7845 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449 | | ||||| || | ||||| || || |||| ||| | || || | |||| Sbjct 7844 CCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCATG 7786 Query 110450 AAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAA 110507 | ||||| ||| |||| |||| |||||| || || | || ||||| | | Sbjct 7785 TGTATGTTCAGCGACTGGGACT--GGTCGATGAAGGCACCACGATCGGCAGCCATCTGCA 7728 Query 110508 TGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGA 110567 || | || | || ||||| || || ||||| |||||| |||||||||| Sbjct 7727 CGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGA 7668 Query 110568 TATCTGAGA-TATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTTG 110626 | ||| || |||||||||| || || || | | ||| | | ||||| |||| Sbjct 7667 TG-CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCA 7609 Query 110627 GACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTG--TTGACAATGACAAACT 110684 ||||| |||||| || | || || |||| || | || ||||||| |||| Sbjct 7608 GACCACAGACCACACTGCACCAGATCCTTGAGCAGC--CATGGATTGACAACTTGGAACT 7551 Query 110685 CACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTAT 110744 | || ||||| | | | | |||||||| | ||| || || |||||||| || || | Sbjct 7550 CGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGT 7491 Query 110745 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 110804 | |||| ||| || | || ||||| || ||||| || |||||||| | ||||| || | Sbjct 7490 TGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGA 7431 Query 110805 GACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTT--GGTTTC 110862 ||| | || |||||| |||| | | |||||||| || || | || || Sbjct 7430 CACCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGA-GATCAGAGGGCTTG 7372 Query 110863 ACCTTC--CCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTT 110920 || || ||||||||| |||| || | || ||||| ||||||| ||||| | | | Sbjct 7371 ACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGAT 7312 Query 110921 TCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATG 110980 |||| || | | | || | ||||| || |||| ||||| || ||| Sbjct 7311 GAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATG 7252 Query 110981 GTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGC 111035 || || ||||| | |||| ||| || ||| ||| || || |||| || Sbjct 7251 GTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGG 7192 Query 111036 GGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095 | || ||| |||| || ||||| || || |||| |||||||| | ||| |||| Sbjct 7191 GCCAAGAAAG-----CATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCA 7137 Query 111096 TATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155 | || ||| || || | ||| ||||| || | || |||| ||| || | Sbjct 7136 TGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGT 7077 Query 111156 TTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCG-AGTCTCT 111214 | || | || |||| |||||| || | | | | | | || | |||| Sbjct 7076 TGCGAACGACGACCTGGGTGACTTCATGCAGCAACTGGAAGTTATA-GCGCTCATTCTCG 7018 Query 111215 TCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTA 111274 | | ||| ||| ||| |||||||| || |||| ||||| ||||| |||||| | Sbjct 7017 TAGTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCATCAGGA 6958 Query 111275 TCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 111334 | | ||||| | || || || || | |||||| || ||| || || | ||||| Sbjct 6957 GCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTTC 6898 Query 111335 TGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 111394 ||||| ||||| |||| ||||||||| | |||| |||| | || ||||| || Sbjct 6897 TGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTT 6838 Query 111395 TGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTT-GGCC-CGT 111451 || | | ||| || || | ||| | | || ||| || || | | || |||| || Sbjct 6837 TGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTT---CAGGGTCTTTTGGCCGCGA 6781 Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA 111511 ||||| ||||||||| ||| || || || |||||||| || ||||| || Sbjct 6780 CCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGG 6721 Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571 || || || || || || | |||| ||| | || | ||| || ||||||||| Sbjct 6720 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATG 6661 Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACC 111630 || || || || ||||| |||| ||||| || | | ||| || ||||||| | || Sbjct 6660 AAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGA-CCTCTTCCTTTCC 6602 Query 111631 TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGAC 111690 ||||| || | || |||||||| | || ||| |||||||||||||| || |||| Sbjct 6601 GTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGAT 6542 Query 111691 TGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747 || | || || || | ||| | |||| || || || || ||| ||| || Sbjct 6541 GGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAA 6482 Query 111748 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGAT 111805 || || | ||| || || || |||| || || || || || ||| || ||| Sbjct 6481 GACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAG-- 6424 Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 111865 |||| | | |||| || | ||||| || |||||| ||| ||||| Sbjct 6423 CCGGTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATG 6364 Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925 ||||| | | || || ||||||| || | || ||||||||| || | | ||| Sbjct 6363 GCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGG 6304 Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985 ||||| |||| ||||| || || || |||||||| || ||||| | ||||| Sbjct 6303 AAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGT 6244 Query 111986 ATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 112044 |||| | || | | |||||| | || ||| ||||| | || || |||| ||||| Sbjct 6243 GTGAAGA-ACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCC 6185 Query 112045 GTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 |||||| | ||||| ||||| | ||||| |||||| Sbjct 6184 CCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGG 6146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627981639684000