Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq638 307 1e-78 seq3478 152 6e-32 >seq638 Length=259535 Score = 307 bits (340), Expect = 1e-78 Identities = 1116/1719 (65%), Gaps = 43/1719 (3%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||| || ||| |||| || |||||||||||||| || |||||||| | Sbjct 7904 TGAACTGAATCGGCGCTGCCGCTGCCTGTGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 7845 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923 || ||||||| | | ||||| | | |||| | | || || | |||| Sbjct 7844 CCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAGG-CTCACGCATG 7786 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 | ||||| ||||| || ||||||||| || ||||| || ||||| | | Sbjct 7785 TGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACG 7726 Query 117984 ACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATA 118043 | | || | ||| ||||| || ||| |||||||| ||| || ||||||||||| Sbjct 7725 ATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATG 7666 Query 118044 TCCACGA-TATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA 118102 | ||| |||| ||||| || ||| || | || ||| | | ||||| |||| || Sbjct 7665 -CTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCAGA 7607 Query 118103 CCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCA 118160 ||| |||||| || ||||||| | || ||| ||||||||| ||||| Sbjct 7606 CCACAGACCACACTGCACCAGATCCTTGAGCAGCCATGG--ATTGACAACTTGGAACTCG 7549 Query 118161 CCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 118220 || ||||| ||| | | ||||||| |||| || || |||||||||||||| ||||| Sbjct 7548 CCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAGCACTCGTTGTTG 7489 Query 118221 CCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 118280 |||| ||| || | || ||||| ||||||||||| ||||| | | |||||| |||| | Sbjct 7488 CCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGACA 7429 Query 118281 CCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAG----TTGAGCTTTGTCTC 118336 || | | | | || |||| | ||||||||||| || ||| | | | Sbjct 7428 CCGTGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGAGATCAGAGGGCT-TGAC 7370 Query 118337 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 118396 | |||||| || |||| |||||||| ||||| | || |||||||| ||| Sbjct 7369 ATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGATGA 7310 Query 118397 ATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 118456 || ||||| ||||||| || | || | || |||||| ||||| || || || Sbjct 7309 GTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATGGT 7250 Query 118457 TTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGC--GAGTCGGCA 118513 || || || | |||| | ||||| || || ||| || | | || Sbjct 7249 CTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGACTCGAAAGGCATGCGGAGGGC 7190 Query 118514 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573 ||| || |||| || ||||| ||||| || | |||||| || || || | ||| || Sbjct 7189 CAA---GAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCATGTT 7133 Query 118574 AGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630 ||| || || |||| || ||||| || ||||||| | | | || || || Sbjct 7132 GCTCTTGCG---GGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCAGGTT 7076 Query 118631 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 118690 ||| |||| |||| |||||| ||| | | | | | | | | |||| | Sbjct 7075 GCGAACGACGACCTGGGTGACTTCATGCAGCAACTGGAAGTTATAGCGCTCATTCTCGTA 7016 Query 118691 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750 | ||| ||| || |||||||| |||||||| || || |||| |||||| | | Sbjct 7015 GTCGACGAACTGTGGCAGGGCGATAGACGCCAGGTTGCAGACAGCAACCTCATCAGGAGC 6956 Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810 || ||||| || || || ||||| | ||| || || ||||||||| | |||||| || Sbjct 6955 AGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATGGTGCCAAGGTTCTTCTG 6896 Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || ||| ||| ||||||||| | |||| | || | || ||||| ||||| Sbjct 6895 GTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGGTTGCCTGTCTCGGTTTG 6836 Query 118871 GGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTT--GGCTCGCCC 118927 | || ||| || || | ||||| | || || || ||| | | || | | || || Sbjct 6835 AGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCT---TCAGGGTCTTTTGGCCGCGACC 6779 Query 118928 CTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 118987 ||| ||||||||| ||| || || || ||||| || || | || | || || Sbjct 6778 CTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGGCC 6719 Query 118988 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAA 119047 || || | ||||| | |||| ||| | || || ||| || ||||||||||| Sbjct 6718 GGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGAA 6659 Query 119048 GAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 119107 ||| || ||||||||||| || |||||| || ||| || | ||||| | || || Sbjct 6658 GAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTG 6599 Query 119108 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 119167 || |||| || | || || | || ||| |||||||| || |||||||| | || Sbjct 6598 GTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGC 6539 Query 119168 GATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224 | | || || | ||| |||| | || || | |||||| ||| || || Sbjct 6538 AAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGAC 6479 Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTA 119282 ||| | ||| || ||||| |||| ||| ||| || || || ||| || ||| | Sbjct 6478 ACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCC--G 6421 Query 119283 TTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCG 119342 |||| | || ||||| || | |||||| || || ||| ||| ||||| || Sbjct 6420 GTGGCACGGATGCGGTGGACGTTGAGACCAATGCCTCCAGCCATCTTGGAGATCATGGCA 6361 Query 119343 CACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAG 119402 || | | || | | ||||| || || || ||| |||| | | | ||||||| Sbjct 6360 CAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAG 6301 Query 119403 CAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGAT 119461 || ||||| || ||||| || || || || ||||| || ||||| | |||||| | Sbjct 6300 CACGACGACAACTG-CGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGT 6242 Query 119462 GAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGA 119499 ||| | || | | |||||| | || |||||||| ||||| Sbjct 6241 GAAGA-ACTTGTTGGACATGTAGTTGTAGGTCT-CAAGA 6205 >seq3478 Length=17986 Score = 152 bits (168), Expect = 6e-32 Identities = 304/445 (68%), Gaps = 4/445 (1%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||||||| | | | ||| |||||||| Sbjct 8699 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTCCATG 8640 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | || || | || | || | | | | ||||||||| Sbjct 8639 AAGTCGAAAGGGTTAGTAGACTTGTAGATCTTCTCGTTGCCGAGAGCGAC-GAGGAGACG 8581 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| | || ||||||| |||| | || ||||| |||| ||| ||| Sbjct 8580 GTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGCAGGGCACA 8521 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || | || || | |||| ||||||||||| | ||||| || | |||||| | Sbjct 8520 GGGCAAGGCCTCGGTCAGGAACTCCTTCTCAATGGCAACAGCATCGGTAATGATGGCTTC 8461 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCT 130025 | | || | ||| || | ||| || || | ||| || ||| || || Sbjct 8460 CACGCGCTGCTTGCTGGGGCGGTTGTTCAG-GTGTGAGAACAGCAAGCAGGCGAAGTCAG 8402 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 ||| |||||||||||||| ||||||||||| || |||||| ||| || ||||| |||| Sbjct 8401 TGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGGCATCAGAC 8342 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||||| |||||| || | | || | |||| |||||| || || || ||| Sbjct 8341 CACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAATACCTTCGACAG 8282 Query 130146 ACGCGAACGCAAAGAGACGCTCAGC 130170 || || |||| || |||| ||| Sbjct 8281 CAGCAAATGCAACAAGGCGCTGAGC 8257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618385609227400