Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq729 127 6e-24 >seq729 Length=198500 Score = 127 bits (140), Expect = 6e-24 Identities = 605/953 (63%), Gaps = 15/953 (2%) Strand=Plus/Plus Query 349271 GCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGT 349330 ||||| || || || ||| | || || ||||||| |||||| || ||||| || |||||| Sbjct 180223 GCAAACGACCAGGGCAACCGTACCACCCCATCATTCGTTGCTTTCACCGACACAGAGCGT 180282 Query 349331 ATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGAT 349390 |||| || ||| |||| || || || | || || || | || || || || || Sbjct 180283 CTGATCGGCGATGCTGCGAAGAACCAGGTCGCCATGAACCCCCACAACACCGTCTTCGAC 180342 Query 349391 GCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAATCTGATCTAAAA 349447 || ||||| | |||||| | | || ||| ||| || | || | || Sbjct 180343 GCGAAGCGGTTGATTGGTCGCAAGTTCCAGGAC---TCTGAGGTGCAGGCCGACATGAAG 180399 Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATAT 349507 || || || || | || | | | ||| || || || | || ||||| || | Sbjct 180400 CACTTCCCCTTCAAGGTCAT-CGAGAAG--GGAAGCAAGCCTGTCATCGAGGTCGAGTTC 180456 Query 349508 AAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATG 349567 || || || || || || ||||| || || || || ||||| | ||| ||| Sbjct 180457 AAGGGCGAGACCAAGCACTTCACCCCCGAGGAGATCTCCTCGATGGTCCTGACTAAGATG 180516 Query 349568 AAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCA 349627 || | ||||| || || | |||| || || | | ||||| | || || || Sbjct 180517 CGCGAGACCGCTGAGGCCTACCTGGGTGGCACCGTCAACAACGCTGTCGTCACCGTTCCT 180576 Query 349628 GCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTA 349687 ||||| || || || ||||||| || || || ||||| || ||||| || | Sbjct 180577 GCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGATGCCGGTTTGATTGCTGGCCTG 180636 Query 349688 AATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAA 349747 || || || | || || || || ||||| || || || || || || || || || || Sbjct 180637 AACGTCCTCCGTATCATCAACGAGCCCACCGCAGCTGCCATCGCCTACGGTCTCGACAAG 180696 Query 349748 ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTA 349807 | | ||| || || | || ||||| || | ||||||||||| || ||||| Sbjct 180697 AAGGTTGAGGGCGAGCGCAACGTCCTCATTTTCGACCTGGGTGGTGGTACCTTCGATGTC 180756 Query 349808 TCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACAT 349867 || || || || | || || || || || || || || | || || || || || || Sbjct 180757 TCCCTCCTGACCATCGAGGAAGGCATCTTCGAGGTCAAGTCCACCGCCGGCGACACTCAC 180816 Query 349868 CTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGT 349927 || ||||| || || || || || |||||||| || || ||||| || || || || Sbjct 180817 CTGGGTGGTGAGGACTTCGACAACCGTCTCGTCAACCACTTCGTTAATGAGTTCAAACG- 180875 Query 349928 CAAGC-TAAAATTGATATTGGAGAT--AATCCTAGAGCAATGCGTCGCCTAAGAACTGCG 349984 |||| ||||| | | | ||| | || || | || ||||||| || ||||||| Sbjct 180876 AAAGCATAAAAAGG--ACTTGAGCTCCAACCCCCGGGCTCTGCGTCGTCTCCGAACTGCT 180933 Query 349985 TGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCT 350044 || || || || |||||| | | || || | |||| ||||| || || || || || Sbjct 180934 TGCGAGCGCGCGAAGCGTACGCTCTCTTCGTCGGCCCAGACCTCGATCGAGATCGACTCC 180993 Query 350045 CTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGT 350104 || || || | || |||| | || || || |||||||| || || || | || Sbjct 180994 CTGTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGAGCTTTGC 181053 Query 350105 ATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATG 350164 ||| ||||| | | || || | ||||| || || | | || || || || Sbjct 181054 CAGGACCTTTTCCGTTCCACCCTGCAGCCTGTCGACCGTGTCCTGACGGACGCTAAGATC 181113 Query 350165 TCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCC 350217 ||| |||| || | || | || | ||||| |||||||| ||||| || Sbjct 181114 GACAAGTCTCAGGTTCACGAGATCGTCCTGGTTGGCGGTTCTACTCGTATCCC 181166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515129857926245