Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq729 127 6e-24
>seq729
Length=198500
Score = 127 bits (140), Expect = 6e-24
Identities = 605/953 (63%), Gaps = 15/953 (2%)
Strand=Plus/Plus
Query 349271 GCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGT 349330
||||| || || || ||| | || || ||||||| |||||| || ||||| || ||||||
Sbjct 180223 GCAAACGACCAGGGCAACCGTACCACCCCATCATTCGTTGCTTTCACCGACACAGAGCGT 180282
Query 349331 ATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGAT 349390
|||| || ||| |||| || || || | || || || | || || || || ||
Sbjct 180283 CTGATCGGCGATGCTGCGAAGAACCAGGTCGCCATGAACCCCCACAACACCGTCTTCGAC 180342
Query 349391 GCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA---CAATCTGATCTAAAA 349447
|| ||||| | |||||| | | || ||| ||| || | || | ||
Sbjct 180343 GCGAAGCGGTTGATTGGTCGCAAGTTCCAGGAC---TCTGAGGTGCAGGCCGACATGAAG 180399
Query 349448 CATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATAT 349507
|| || || || | || | | | ||| || || || | || ||||| || |
Sbjct 180400 CACTTCCCCTTCAAGGTCAT-CGAGAAG--GGAAGCAAGCCTGTCATCGAGGTCGAGTTC 180456
Query 349508 AAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATG 349567
|| || || || || || ||||| || || || || ||||| | ||| |||
Sbjct 180457 AAGGGCGAGACCAAGCACTTCACCCCCGAGGAGATCTCCTCGATGGTCCTGACTAAGATG 180516
Query 349568 AAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCA 349627
|| | ||||| || || | |||| || || | | ||||| | || || ||
Sbjct 180517 CGCGAGACCGCTGAGGCCTACCTGGGTGGCACCGTCAACAACGCTGTCGTCACCGTTCCT 180576
Query 349628 GCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTA 349687
||||| || || || ||||||| || || || ||||| || ||||| || |
Sbjct 180577 GCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGATGCCGGTTTGATTGCTGGCCTG 180636
Query 349688 AATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAA 349747
|| || || | || || || || ||||| || || || || || || || || || ||
Sbjct 180637 AACGTCCTCCGTATCATCAACGAGCCCACCGCAGCTGCCATCGCCTACGGTCTCGACAAG 180696
Query 349748 ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTA 349807
| | ||| || || | || ||||| || | ||||||||||| || |||||
Sbjct 180697 AAGGTTGAGGGCGAGCGCAACGTCCTCATTTTCGACCTGGGTGGTGGTACCTTCGATGTC 180756
Query 349808 TCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACAT 349867
|| || || || | || || || || || || || || | || || || || || ||
Sbjct 180757 TCCCTCCTGACCATCGAGGAAGGCATCTTCGAGGTCAAGTCCACCGCCGGCGACACTCAC 180816
Query 349868 CTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGT 349927
|| ||||| || || || || || |||||||| || || ||||| || || || ||
Sbjct 180817 CTGGGTGGTGAGGACTTCGACAACCGTCTCGTCAACCACTTCGTTAATGAGTTCAAACG- 180875
Query 349928 CAAGC-TAAAATTGATATTGGAGAT--AATCCTAGAGCAATGCGTCGCCTAAGAACTGCG 349984
|||| ||||| | | | ||| | || || | || ||||||| || |||||||
Sbjct 180876 AAAGCATAAAAAGG--ACTTGAGCTCCAACCCCCGGGCTCTGCGTCGTCTCCGAACTGCT 180933
Query 349985 TGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCT 350044
|| || || || |||||| | | || || | |||| ||||| || || || || ||
Sbjct 180934 TGCGAGCGCGCGAAGCGTACGCTCTCTTCGTCGGCCCAGACCTCGATCGAGATCGACTCC 180993
Query 350045 CTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGT 350104
|| || || | || |||| | || || || |||||||| || || || | ||
Sbjct 180994 CTGTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGAGCTTTGC 181053
Query 350105 ATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATG 350164
||| ||||| | | || || | ||||| || || | | || || || ||
Sbjct 181054 CAGGACCTTTTCCGTTCCACCCTGCAGCCTGTCGACCGTGTCCTGACGGACGCTAAGATC 181113
Query 350165 TCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCC 350217
||| |||| || | || | || | ||||| |||||||| ||||| ||
Sbjct 181114 GACAAGTCTCAGGTTCACGAGATCGTCCTGGTTGGCGGTTCTACTCGTATCCC 181166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515129857926245
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |