Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq638 320 2e-82 seq6274 178 1e-39 seq3478 125 8e-24 >seq638 Length=259535 Score = 320 bits (354), Expect = 2e-82 Identities = 530/755 (70%), Gaps = 10/755 (1%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| ||||| | || ||| || ||| || | | | || | |||||| ||| || Sbjct 6161 ATGCGTGTCGCTGTTGGCATCTGGGGGGACAACATCGAGAGGGTTCTTGAGACCTACAAC 6220 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| | | |||| ||| || ||||| ||||||| |||||||| || || ||| | Sbjct 6221 TACATGTCCAACAAGTTCTTCACACACGCGTCGCCAACGCTGTTCAATGCCGGCACGCCT 6280 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || | ||| ||||| |||||||| || | |||||||| ||| || || |||||| Sbjct 6281 CAGGCGCAGTTGTCGTCGTGCTTCCTCGTTGACATGAAGGAGGACAGCATTGAGGGCATC 6340 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 || || || || ||| |||||| ||||||||| | | || || || ||| || || Sbjct 6341 TATGATACCCTGAAGACCTGTGCCATGATCTCCAAGATGGCTGGAGGCATTGGTCTCAAC 6400 Query 53435 TGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | || ||||||| | |||| | ||| || || |||||| || ||| Sbjct 6401 G--TCCACCGCATCCGTGCCACCGGCTCCTACATCGCTGGCACCAACGGCACGTCCAATG 6458 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | ||| | |||||| | || |||||||||||||| ||||| |||||| | |||||||| Sbjct 6459 GCATCATCCCTATGTTGCGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGGTGGCA 6518 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 |||||| || | || ||||||||||| ||||| |||||||| || | | |||| Sbjct 6519 ATAAGCGCCCCGGTGCTTTTGCCATCTACCTGGAGCCATGGCACGCTGATGTCTTCGAGT 6578 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACA 53671 | ||||| ||||| ||| || || | |||||| | || ||| |||||||| || Sbjct 6579 TCCTCGACCTGCGGAAGAACCACGGAAAGGAAGAGGTCCG-TGCTCGTGACCTCTTCCTT 6637 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || ||||| ||||| ||||||||| | || |||||| ||| || ||| ||| Sbjct 6638 GCCCTCTGGATCCCGGATCTCTTCATGAAGCGTGTAGAGAAGAACGGCGACTGGACTCTG 6697 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCC-TCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 |||||||| |||||||||||||||| | | | || |||||| |||||||| | | | Sbjct 6698 ATGTGCCCCAACGAGTGCCCCGGCCTTGCCGACTG-CTACGGCGAGGAGTTCGAGGCTCT 6756 Query 53791 GTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849 ||| || ||||| || | |||| ||| | | |||| | ||||||| || | | Sbjct 6757 GTACGAGAAGTACG-AGCGCGAGGGTCGCGGCCAAAAGACCCTGAAGGCGCAGAAGCTCT 6815 Query 53850 GGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATT 53909 || |||| |||||| || || ||||| || | || | ||||| ||||||||| Sbjct 6816 GGTATGCCATCCTCGAGGCTCAAACCGAGACAGGCAACCCCTTCATGTTGTACAAGGATC 6875 Query 53910 CGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 | |||| |||||||||||||||||| | ||| Sbjct 6876 ACGCCAACCGCAAGAGCAACCAGAAGAACCTTGGC 6910 Score = 111 bits (122), Expect = 2e-19 Identities = 304/454 (67%), Gaps = 25/454 (6%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||| | || | ||||||| ||||| || || ||||| | |||||| |||||||| Sbjct 7433 CGCAACAGCTTGTTGATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCTGGGCAAC 7492 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| || ||||| || || |||||||||| | |||||| || || || ||| Sbjct 7493 AACGAGTGCTTTGAGCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGCTGGCGAG 7552 Query 55604 TT------TGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGG 55657 || ||||| ||| || | || ||||||| ||| | || |||| Sbjct 7553 TTCCAAGTTGTCA--ATC--CATGG--CTGCTCAAGGATCTGGTGCAGTGTGGTCTGTGG 7606 Query 55658 AACCCGCAGATCAAGA--CGGAT-ATTG-TGCGGAACGGGGGGTCCGTCCAGAATCT--G 55711 | | | |||| || || || | || ||| || || |||||||| | | Sbjct 7607 TCTGAGGACCTGAAGAACCGCATCATCGCTGAGGAT----GGCTCTATCCAGAATATTCG 7662 Query 55712 GAGATTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAG 55770 || ||| | | |||||| | ||| ||| || |||||||| | |||| || Sbjct 7663 CAGCATCCCAGATGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCGCAGAGGAC 7722 Query 55771 TCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT 55830 | | | ||| ||| ||||||||||| | |||||||||||||||||| |||||||| Sbjct 7723 CATCGTGCAGATGGCTGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACAT 7782 Query 55831 CTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCG-ATGCACTTTTACGGGTGGAAGA 55889 |||| | ||||| ||| |||| | | || | |||||||| ||| |||||| Sbjct 7783 ACACATGCGTGAGCCTTCTATGGGCAAGATCA-CTAGCATGCACTTCACCGGTTGGAAGC 7841 Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 ||| |||||||| || |||||||| || || || Sbjct 7842 TGGGTCTCAAGACTGGCATGTACTACCTCCGCAC 7875 >seq6274 Length=85270 Score = 178 bits (196), Expect = 1e-39 Identities = 209/281 (74%), Gaps = 4/281 (1%) Strand=Plus/Minus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 || || || || ||||| |||| ||| |||||||| | ||||| || ||||| | |||| Sbjct 17179 AGACGGGTAAAGATGTATCGAGCGCTGGCAGCATCGCTACCACCGGCGAGACGAGAACCG 17120 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | || || |||||||||| ||| | |||||| | ||||||||||| || |||| | Sbjct 17119 AAATTGCCGCTGGGCTCCAAGATGTTGACGTTGTTCGAACCCACAAAGTTCTGTGCCAGG 17060 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 || || || ||| || |||||||| |||||||| || ||||| || | ||| Sbjct 17059 CCGATGATGGTCTGTTGCAGTGAGGCCTCACCGTGGTGATAAGCAGTCTGTTCAGAGACG 17000 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536 ||||| ||||| | |||||||| |||| ||| | |||||| ||||| ||| || Sbjct 16999 TAGCCAGCCAGTTCGACCACCTTCTTGTCCTTGA--TTAGGTTCCGCTTGAAGCAAGCGA 16942 Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACG 117577 | | ||||||||||| | ||||||||||||||| ||||| Sbjct 16941 ACACAACCTTGCGCTGGCCAGGCTTCAGACCATCCACCACG 16901 Score = 143 bits (158), Expect = 3e-29 Identities = 298/441 (68%), Gaps = 2/441 (0%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 ||||| ||||| || || || |||||| || | ||| || | | |||||||| | | Sbjct 17326 CCGGTTCCGATACCATCAGCGCCGTTGCAGAGGACCATTGGGAGGACTGGGGCGTACA-C 17268 Query 151936 TC-CGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994 || |||||| | || | || || || | | | || | ||| | | |||| | Sbjct 17267 TCTCGGCTCAATTTGCTTGCCATCCTCGAACTGGGCTTCGAGAACTGGCTCGTCAAGAGC 17208 Query 151995 ATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGC 152054 | ||| | ||| || | | ||| || ||| || ||||||||||| | |||||| || Sbjct 17207 AGAGAACACCCGCCGGGCGAAGGGAGACAGACGGGTAAAGATGTATCGAGCGCTGGCAGC 17148 Query 152055 ATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTT 152114 ||| | ||||| || || || | || || | || |||||| | || ||||| ||| Sbjct 17147 ATCGCTACCACCGGCGAGACGAGAACCGAAATTGCCGCTGGGCTCCAAGATGTTGACGTT 17088 Query 152115 GTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACC 152174 ||| | ||||| || ||||| |||| | || || ||||| || ||||| Sbjct 17087 GTTCGAACCCACAAAGTTCTGTGCCAGGCCGATGATGGTCTGTTGCAGTGAGGCCTCACC 17028 Query 152175 GTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGT 152234 ||||||||| || ||||| || | || ||| || |||| | |||||||| ||||| | Sbjct 17027 GTGGTGATAAGCAGTCTGTTCAGAGACGTAGCCAGCCAGTTCGACCACCTTCTTGTCCTT 16968 Query 152235 CGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTC 152294 | |||||| ||||| || ||| | | |||||||||||| || |||| ||| || Sbjct 16967 GATTAGGTTCCGCTTGAAGCAAGCGAACACAACCTTGCGCTGGCCAGGCTTCAGACCATC 16908 Query 152295 CACCACGTGAGGAATCGAACG 152315 ||||||| ||||| || || Sbjct 16907 CACCACGGACGGAATGGATCG 16887 >seq3478 Length=17986 Score = 125 bits (138), Expect = 8e-24 Identities = 305/454 (67%), Gaps = 20/454 (4%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || ||||| || ||||| || || |||||||||||||| | | |||||||||||||| Sbjct 8699 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTCCATG 8640 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTC----CCCAAACTGTGCCATGAG 74578 ||||||||||||| | | ||| || |||||| || | | | | | ||| Sbjct 8639 AAGTCGAAAGGGTTAGTAGACTTGTAGAT---CTTCTCGTTGCCGAGAGCGA-CGAGGAG 8584 Query 74579 GCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTT 74638 || || || || |||| ||||||||| |||| |||| |||||||| || Sbjct 8583 ACGGTCGGCGACGAATTCGATGTACTGCTTCATCAAGTTGGCATTCATGCCGAGCAGGGC 8524 Query 74639 GCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTT 74698 || |||| |||||||| | ||||| |||| | | |||| ||| || ||| | Sbjct 8523 ACAGGGCAAGGCCTCGGTCAGGAACTCCTTCTCAA--TGGCAACAGCATCGGT-AATGAT 8467 Query 74699 G---TGAATGT-CT--TTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGCGTCACGGC 74752 | | | | || ||| |||| || | ||||||| ||| | ||| ||| Sbjct 8466 GGCTTCCACGCGCTGCTTGCTGGGGCGGTTGT---TCAGGTGTGAGAACAGCAAGCAGGC 8410 Query 74753 AAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812 || || ||| || || || | || | ||| || || || | |||||||| Sbjct 8409 GAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGG 8350 Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCC 74872 ||| || ||||||||||||| ||| ||||||| | ||| | ||||||||||| || || Sbjct 8349 CATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCACTGAAGAAAATACC 8290 Query 74873 TTCGACACACGCAAAGGCGACAAGGCGTTGCGCG 74906 ||||||| ||||| || |||||||| || ||| Sbjct 8289 TTCGACAGCAGCAAATGCAACAAGGCGCTGAGCG 8256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547172120117000