Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq2112 154 1e-32
>seq2112
Length=5501
Score = 154 bits (170), Expect = 1e-32
Identities = 216/302 (72%), Gaps = 6/302 (2%)
Strand=Plus/Minus
Query 30061 CACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117
|||||| ||||| | ||||| |||||||| || || ||||||| || ||| ||
Sbjct 3941 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 3885
Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177
||||||||| |||| || |||||| || | ||| | ||||| ||| | || |||
Sbjct 3884 GGGGTTCCACGCGCTCAGGATGATCCGGCGGTCGTGCGGGTTCGTCCGCAGCTTGTGCAC 3825
Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237
| | | |||||| || || ||| || | |||||| || | | ||| ||||||
Sbjct 3824 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 3765
Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297
|| ||||| |||| |||||||||||||||||| || || ||||| ||||| || | |||
Sbjct 3764 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTG 3705
Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357
| | | |||| |||||| || | | || |||||| ||||||||||||| || ||
Sbjct 3704 CGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCC 3645
Query 30358 CT 30359
||
Sbjct 3644 CT 3643
Score = 118 bits (130), Expect = 9e-22
Identities = 143/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 29852 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCT 29911
||||||| ||| ||||| ||| |||| ||||||| |||| ||||||||| |||||
Sbjct 4234 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 4175
Query 29912 CCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29970
|||| | ||| | || || ||||| | || || ||||| || | ||||| |||
Sbjct 4174 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGACCATGTGCGT 4116
Query 29971 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 30030
|| || | ||||||||||||||| || || || ||||| |||||||| | |||| |||
Sbjct 4115 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGACCGCTG 4056
Query 30031 GTAGAGCTGACA 30042
||| ||||| ||
Sbjct 4055 GTACAGCTGGCA 4044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406278633510180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |