Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq373 125 6e-24 seq6049 96.9 3e-15 >seq373 Length=59380 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||| |||||| | || || || || |||||| | || Sbjct 42 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 101 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || || ||||||||||| || || || || || || || Sbjct 102 GATACGATCGACAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 161 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || |||||||| | ||| | || || |||||| Sbjct 162 CAGCGTCTTATCTTCGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAAC 221 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || ||||| ||||| |||| ||||| Sbjct 222 ATCCAGAAGGAGTCGACACTGCACTTGGTGCTGCGTCTGCGTGGTGG 268 >seq6049 Length=106314 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || || ||||| |||||| |||| || ||||| ||||| | |||||| | || Sbjct 70330 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 70271 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || || ||||| || || || || || ||||||||||| || Sbjct 70270 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAACAGCGATTG 70211 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | ||||||||| || | || || | || ||||||| |||||||| || ||| Sbjct 70210 ATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAAG 70151 Query 27177 G 27177 | Sbjct 70150 G 70150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434883524980800