Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2112 138 1e-27 >seq2112 Length=5501 Score = 138 bits (152), Expect = 1e-27 Identities = 274/398 (69%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 |||||||| ||||| || || |||| | || ||| | | ||||| || |||||| Sbjct 3546 CCGCTGCTCACGACCAAGCGCGTGTTCCACCGGGCGGTGCTGGCCGAGCTCCTCTGGTTC 3605 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 ||| ||| || ||| | | |||| | | ||| || ||||||||||||| Sbjct 3606 GTGTCGGGCGCGACGTCGTCGCTGCCGCTCAGCGCGCAGGGCGTCAAGATCTGGGACGGC 3665 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCCATCTCGGGAGGAGGGCGACTT 34401 |||| || || | || ||||||| ||| ||| | | || |||||||||||| | Sbjct 3666 AACGGCTCGCGCGCGTTCCTGGACA-GCGTGGGCCTGGCGCACCGCGAGGAGGGCGACCT 3724 Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCG-AAG 34460 ||||| || ||||||||||||||| | ||||| || || ||||| || | ||| | Sbjct 3725 CGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTCGGCGCCGAGTA-CGTCGACGCGCGCG 3783 Query 34461 CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGA 34520 ||||||| | || ||||| | ||||||||| | | || | ||| || | || Sbjct 3784 CGGACTACGCCGGCCAGGGCGTCGACCAGCTGGCGGAGGTCGTGCACAAGCTGCGGACGA 3843 Query 34521 ACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGG 34580 |||| | ||| | ||||| | || ||||||||||||| ||||| || | |||| Sbjct 3844 ACCCGCACGACCGCCGGATCATCCTGAGCGCGTGGAACCCCAAGGACCTGAAGATCATGG 3903 Query 34581 CGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617 |||| || |||||||||| | ||| || |||||||| Sbjct 3904 CGCTGCCGCCGTGCCACA-TGTTTGCGCAGTTCTACGT 3940 Score = 138 bits (152), Expect = 1e-27 Identities = 274/398 (69%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786 |||||||| || ||| | |||||||||| || |||||||| | || ||||| || Sbjct 3940 ACGTAGAACTGCGCAAACA-TGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGGG 3882 Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846 ||||||||||| || | ||||| | ||| | |||||| | || ||| | || Sbjct 3881 GTTCCACGCGCTCAGGATGATCCGGCGGTCGTGCGGGTTCGTCCGCAGCTTGTGCACGAC 3822 Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCG 6905 | | ||||||||| | ||||| || | |||||||| ||| | || ||||| | Sbjct 3821 CTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACG-TACTCGG 3763 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965 | || ||||| | ||||||||||||||| || ||||| | |||||||||||| || | Sbjct 3762 CGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTGCG 3703 Query 6966 GGA-ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 | ||| ||| ||||||| || | || || |||| ||||||||||||| || ||| Sbjct 3702 CCAGGCCCACGC-TGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCC 3644 Query 7025 CGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACC 7084 | | |||| | | ||| || ||| ||||||||| || ||||| | | | Sbjct 3643 TGCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGGCCAGC 3584 Query 7085 ACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 || || | |||| || || ||||| |||||||| Sbjct 3583 ACCGCCCGGTGGAACACGCGCTTGGTCGTGAGCAGCGG 3546 Score = 107 bits (118), Expect = 2e-18 Identities = 164/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 34620 CGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGC 34679 |||| || | ||| ||||||||| || || || || | |||||||| | || |||| Sbjct 4027 CGAAGGGCCACCTGCACTGCCAGCTGTACCAGCGGTCCTGCGACATGGGCCTCGGCGTGC 4086 Query 34680 CGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGG 34739 |||||||||| || || ||||| ||||| ||| ||||| |||| || || ||| | Sbjct 4087 CGTTCAACATCGCCAGCTACGCGCTGCTGACGCACATGGTCGCGCACGT-GTGCGACCTC 4145 Query 34740 TTCCTGGGGAG-CTGGTGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCG 34796 ||| ||| || ||| || |||| |||| || ||||| ||||| || ||||| | | Sbjct 4146 GTCCCGGGCAGCCTGACGC--ACGTCATGGGCGACGCGCACGTCTACGTGGACCACGTGG 4203 Query 34797 AGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845 | |||||||| |||||| | || ||||| || |||||| |||| Sbjct 4204 ACGCGCTCCGGACGCAGCTGGAGCGGGAGCCGCGCGAGTTCCCGGAGCT 4252 Score = 107 bits (118), Expect = 2e-18 Identities = 164/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559 |||| |||||| || ||||| || | |||||| |||||||| || | ||||| | Sbjct 4252 AGCTCCGGGAACTCGCGCGGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCC 4193 Query 6560 AGGTAGATATGCGCATCCCCCA--ACGTATGCACCAG-CTCCCCAGGAACCAACCCCACG 6616 | ||||| ||||| || |||| |||| || ||| || ||| ||| | ||| Sbjct 4192 ACGTAGACGTGCGCGTCGCCCATGACGT--GCGTCAGGCTGCCCGGGACGAGGTCGCAC- 4136 Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || || |||| ||||| ||| ||||| ||||| || || |||||||||||||| || | Sbjct 4135 ACGTGCGCGACCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGG 4076 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCG 6725 |||||||| | || || || || ||||||||| ||| | || |||| Sbjct 4075 CCCATGTCGCAGGACCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTCG 4027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448226454958800