Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq2112 138 1e-27
>seq2112
Length=5501
Score = 138 bits (152), Expect = 1e-27
Identities = 274/398 (69%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
|||||||| ||||| || || |||| | || ||| | | ||||| || ||||||
Sbjct 3546 CCGCTGCTCACGACCAAGCGCGTGTTCCACCGGGCGGTGCTGGCCGAGCTCCTCTGGTTC 3605
Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342
||| ||| || ||| | | |||| | | ||| || |||||||||||||
Sbjct 3606 GTGTCGGGCGCGACGTCGTCGCTGCCGCTCAGCGCGCAGGGCGTCAAGATCTGGGACGGC 3665
Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCCATCTCGGGAGGAGGGCGACTT 34401
|||| || || | || ||||||| ||| ||| | | || |||||||||||| |
Sbjct 3666 AACGGCTCGCGCGCGTTCCTGGACA-GCGTGGGCCTGGCGCACCGCGAGGAGGGCGACCT 3724
Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCG-AAG 34460
||||| || ||||||||||||||| | ||||| || || ||||| || | ||| |
Sbjct 3725 CGGCCCCGTGTACGGGTTCCAGTGGCGGCACTTCGGCGCCGAGTA-CGTCGACGCGCGCG 3783
Query 34461 CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGA 34520
||||||| | || ||||| | ||||||||| | | || | ||| || | ||
Sbjct 3784 CGGACTACGCCGGCCAGGGCGTCGACCAGCTGGCGGAGGTCGTGCACAAGCTGCGGACGA 3843
Query 34521 ACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGG 34580
|||| | ||| | ||||| | || ||||||||||||| ||||| || | ||||
Sbjct 3844 ACCCGCACGACCGCCGGATCATCCTGAGCGCGTGGAACCCCAAGGACCTGAAGATCATGG 3903
Query 34581 CGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT 34617
|||| || |||||||||| | ||| || ||||||||
Sbjct 3904 CGCTGCCGCCGTGCCACA-TGTTTGCGCAGTTCTACGT 3940
Score = 138 bits (152), Expect = 1e-27
Identities = 274/398 (69%), Gaps = 6/398 (2%)
Strand=Plus/Minus
Query 6728 ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
|||||||| || ||| | |||||||||| || |||||||| | || ||||| ||
Sbjct 3940 ACGTAGAACTGCGCAAACA-TGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGGG 3882
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
||||||||||| || | ||||| | ||| | |||||| | || ||| | ||
Sbjct 3881 GTTCCACGCGCTCAGGATGATCCGGCGGTCGTGCGGGTTCGTCCGCAGCTTGTGCACGAC 3822
Query 6847 GTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCG 6905
| | ||||||||| | ||||| || | |||||||| ||| | || ||||| |
Sbjct 3821 CTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACG-TACTCGG 3763
Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965
| || ||||| | ||||||||||||||| || ||||| | |||||||||||| || |
Sbjct 3762 CGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTGCG 3703
Query 6966 GGA-ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024
| ||| ||| ||||||| || | || || |||| ||||||||||||| || |||
Sbjct 3702 CCAGGCCCACGC-TGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCC 3644
Query 7025 CGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACC 7084
| | |||| | | ||| || ||| ||||||||| || ||||| | | |
Sbjct 3643 TGCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGGCCAGC 3584
Query 7085 ACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122
|| || | |||| || || ||||| ||||||||
Sbjct 3583 ACCGCCCGGTGGAACACGCGCTTGGTCGTGAGCAGCGG 3546
Score = 107 bits (118), Expect = 2e-18
Identities = 164/229 (72%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 34620 CGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGC 34679
|||| || | ||| ||||||||| || || || || | |||||||| | || ||||
Sbjct 4027 CGAAGGGCCACCTGCACTGCCAGCTGTACCAGCGGTCCTGCGACATGGGCCTCGGCGTGC 4086
Query 34680 CGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGG 34739
|||||||||| || || ||||| ||||| ||| ||||| |||| || || ||| |
Sbjct 4087 CGTTCAACATCGCCAGCTACGCGCTGCTGACGCACATGGTCGCGCACGT-GTGCGACCTC 4145
Query 34740 TTCCTGGGGAG-CTGGTGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCG 34796
||| ||| || ||| || |||| |||| || ||||| ||||| || ||||| | |
Sbjct 4146 GTCCCGGGCAGCCTGACGC--ACGTCATGGGCGACGCGCACGTCTACGTGGACCACGTGG 4203
Query 34797 AGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845
| |||||||| |||||| | || ||||| || |||||| ||||
Sbjct 4204 ACGCGCTCCGGACGCAGCTGGAGCGGGAGCCGCGCGAGTTCCCGGAGCT 4252
Score = 107 bits (118), Expect = 2e-18
Identities = 164/229 (72%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559
|||| |||||| || ||||| || | |||||| |||||||| || | ||||| |
Sbjct 4252 AGCTCCGGGAACTCGCGCGGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCC 4193
Query 6560 AGGTAGATATGCGCATCCCCCA--ACGTATGCACCAG-CTCCCCAGGAACCAACCCCACG 6616
| ||||| ||||| || |||| |||| || ||| || ||| ||| | |||
Sbjct 4192 ACGTAGACGTGCGCGTCGCCCATGACGT--GCGTCAGGCTGCCCGGGACGAGGTCGCAC- 4136
Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676
|| || |||| ||||| ||| ||||| ||||| || || |||||||||||||| || |
Sbjct 4135 ACGTGCGCGACCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGG 4076
Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCG 6725
|||||||| | || || || || ||||||||| ||| | || ||||
Sbjct 4075 CCCATGTCGCAGGACCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTCG 4027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448226454958800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |