Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq373 89.7 4e-13 >seq373 Length=59380 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || || ||| || || || || || || | || || || |||| || Sbjct 251 CACCAAGTGCAGTGTCGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTCTTC 192 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| |||||||| || ||||||||||||||||| | ||| | | ||| |||| | | Sbjct 191 CAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGT-CTT 133 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || | | | | ||| | | | |||||| || ||||| || | ||||| | | Sbjct 132 GAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCT 73 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | |||||||| || || || ||||||||||| Sbjct 72 TGCCCGTCAGGGTCTTGACGAAGATTTGCAT 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429512016916895