Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq2112 127 2e-24
>seq2112
Length=5501
Score = 127 bits (140), Expect = 2e-24
Identities = 145/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683
||||||| ||| ||||| ||| |||| ||||||||||| | ||||||||| || ||
Sbjct 4234 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 4175
Query 29684 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742
|||| | ||| | || || ||||| | || || ||||| || | ||||| |||
Sbjct 4174 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGACCATGTGCGT 4116
Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802
|| || | ||||||||||||||| || ||||| ||||| |||||||| | |||| |||
Sbjct 4115 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGACCGCTG 4056
Query 29803 GTAGAGCTGGCA 29814
||| ||||||||
Sbjct 4055 GTACAGCTGGCA 4044
Score = 105 bits (116), Expect = 5e-18
Identities = 207/313 (66%), Gaps = 6/313 (2%)
Strand=Plus/Minus
Query 29833 CACGTAAAACTG---ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTT 29889
|||||| ||||| | ||||| |||||||| || || ||||||| || ||| ||
Sbjct 3941 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 3885
Query 29890 GGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 29949
||||||||| || | || |||||| || | ||| | ||||| ||| | || |||
Sbjct 3884 GGGGTTCCACGCGCTCAGGATGATCCGGCGGTCGTGCGGGTTCGTCCGCAGCTTGTGCAC 3825
Query 29950 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNN 30009
| | | |||||| || || ||| || | |||||| |
Sbjct 3824 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 3765
Query 30010 NNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30069
|||| |||| |||||||||||||||||| || || ||||| ||||| || | |||
Sbjct 3764 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTG 3705
Query 30070 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30129
| | | |||| |||||| || | | || |||||| ||||||||||||| || ||
Sbjct 3704 CGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCC 3645
Query 30130 CTTCTCGGAGAGC 30142
|| | || ||||
Sbjct 3644 CTGCGCGCTGAGC 3632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406131445018690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |