Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq2112 143 2e-29
>seq2112
Length=5501
Score = 143 bits (158), Expect = 2e-29
Identities = 205/289 (71%), Gaps = 0/289 (0%)
Strand=Plus/Minus
Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407
||||||||| || || ||||||| || ||| ||||||||||| |||| || ||||||
Sbjct 3920 GTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGGGGTTCCACGCGCTCAGGATGAT 3861
Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 27467
|| | ||| | ||||| ||| | || |||| | | |||||| || || ||
Sbjct 3860 CCGGCGGTCGTGCGGGTTCGTCCGCAGCTTGTGCACGACCTCCGCCAGCTGGTCGACGCC 3801
Query 27468 CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527
| || | |||||| | | | ||| |||||| || ||||| |||| ||| |||||
Sbjct 3800 CTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTCGGCGCCGAAGTGCCGCCACTGGAA 3741
Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 27587
||||||||| || || ||||| ||||| || | |||| | | |||| |||||| ||
Sbjct 3740 CCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTGCGCCAGGCCCACGCTGTCCAGGAA 3681
Query 27588 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGC 27636
| | || |||||| ||||||||||||| || |||| | || ||||
Sbjct 3680 CGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTGCGCGCTGAGC 3632
Score = 123 bits (136), Expect = 2e-23
Identities = 144/192 (75%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 27118 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 27177
||||||| ||| ||||| ||| |||| |||||||| |||| ||||||||| |||||
Sbjct 4234 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 4175
Query 27178 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 27236
|||| | ||| | || || ||||| | || || ||||| || | ||||| |||
Sbjct 4174 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGACCATGTGCGT 4116
Query 27237 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 27296
|| || | ||||||||||||||| || || || ||||| |||||||| | |||| |||
Sbjct 4115 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGACCGCTG 4056
Query 27297 GTAGAGCTGACA 27308
||| ||||| ||
Sbjct 4055 GTACAGCTGGCA 4044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369478310887865
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |