Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015- 07-09] 6,415 sequences; 44,668,886 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq2112 143 2e-29 >seq2112 Length=5501 Score = 143 bits (158), Expect = 2e-29 Identities = 205/289 (71%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407 ||||||||| || || ||||||| || ||| ||||||||||| |||| || |||||| Sbjct 3920 GTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGGGGTTCCACGCGCTCAGGATGAT 3861 Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 27467 || | ||| | ||||| ||| | || |||| | | |||||| || || || Sbjct 3860 CCGGCGGTCGTGCGGGTTCGTCCGCAGCTTGTGCACGACCTCCGCCAGCTGGTCGACGCC 3801 Query 27468 CATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAA 27527 | || | |||||| | | | ||| |||||| || ||||| |||| ||| ||||| Sbjct 3800 CTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTCGGCGCCGAAGTGCCGCCACTGGAA 3741 Query 27528 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 27587 ||||||||| || || ||||| ||||| || | |||| | | |||| |||||| || Sbjct 3740 CCCGTACACGGGGCCGAGGTCGCCCTCCTCGCGGTGCGCCAGGCCCACGCTGTCCAGGAA 3681 Query 27588 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGC 27636 | | || |||||| ||||||||||||| || |||| | || |||| Sbjct 3680 CGCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTGCGCGCTGAGC 3632 Score = 123 bits (136), Expect = 2e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 27118 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 27177 ||||||| ||| ||||| ||| |||| |||||||| |||| ||||||||| ||||| Sbjct 4234 GGCTCCCGCTCCAGCTGCGTCCGGAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 4175 Query 27178 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 27236 |||| | ||| | || || ||||| | || || ||||| || | ||||| ||| Sbjct 4174 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGACCATGTGCGT 4116 Query 27237 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTG 27296 || || | ||||||||||||||| || || || ||||| |||||||| | |||| ||| Sbjct 4115 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCAGGACCGCTG 4056 Query 27297 GTAGAGCTGACA 27308 ||| ||||| || Sbjct 4055 GTACAGCTGGCA 4044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369478310887865