Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1214 116 9e-21
seq2574 105 2e-17
seq6049 100 7e-16
seq373 84.2 5e-11
>seq1214
Length=170273
Score = 116 bits (128), Expect = 9e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || || || ||||| || ||||||||||| |||| | || | || ||
Sbjct 100676 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCC 100735
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| || | ||| ||||| | | || || ||||| ||
Sbjct 100736 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 100795
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| | || | | |||| ||| ||| || ||||| || |||||
Sbjct 100796 TGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 100855
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||||||| ||||| ||||||| ||||||
Sbjct 100856 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 100887
>seq2574
Length=14985
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | || | ||||| || || || || ||||| ||
Sbjct 3 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATC 62
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||||| | ||| || ||||| || || || || |||||| | ||
Sbjct 63 AGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 122
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| | |||| || ||| || |||||||| || || ||||| ||||| ||||| ||||||
Sbjct 123 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAG 182
Query 152097 ACCTGCATTTT 152107
| |||||| ||
Sbjct 183 ATCTGCATCTT 193
>seq6049
Length=106314
Score = 100 bits (110), Expect = 7e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | ||| | ||||| || || || |||||||||||
Sbjct 70152 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 70211
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
| | ||| || |||| | ||| || ||||| || || || || ||||| | ||
Sbjct 70212 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 70271
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| | |||| ||| ||| || ||||| || ||||| |||||||| || ||||||||||||
Sbjct 70272 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAG 70331
>seq373
Length=59380
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/208 (69%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| || | | || | || ||||| |
Sbjct 248 CAAG-TGCAGTGTCGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTCTTCCA 190
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || ||||||||||| | ||||||||| | | || || ||||| |||||||
Sbjct 189 GCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAA 130
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || || | || | | || || || || || || || || || ||||
Sbjct 129 TCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCTTGC 70
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || ||||| ||||||| |||||
Sbjct 69 CCGTCAGGGTCTTGACGAAGATTTGCAT 42
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153725964944465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |