Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1214 178 3e-39
seq373 176 9e-39
seq6049 161 2e-34
seq2574 147 5e-30
seq3478 105 1e-17
>seq1214
Length=170273
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || ||||| || | ||| || || |||||||||||||| |
Sbjct 100660 ACCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 100719
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| || || || || || ||||||| || |||||||| ||
Sbjct 100720 GAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGG 100779
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| |||||||| || || || | ||||| ||||| |||| || ||
Sbjct 100780 AATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCAC 100839
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 100840 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 100887
>seq373
Length=59380
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || |||| || | || || || ||||||||||||||||
Sbjct 268 CCACCACGCAGACGCAGCACCAAGTGCAGTGTCGACTCCTTCTGGATGTTGTAGTCAGAC 209
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| ||||| || || || || || || || ||||| | ||| || ||||| |||
Sbjct 208 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 149
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||||||||||||||| ||||| || || ||| | ||||| || ||||| | ||| ||
Sbjct 148 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACC 89
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||||||||| ||||||| ||||| ||||| || |||||
Sbjct 88 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 42
>seq6049
Length=106314
Score = 161 bits (178), Expect = 2e-34
Identities = 143/179 (80%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | ||| |||||||||||||| || || || ||||| ||||||
Sbjct 70152 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 70211
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| || ||||| || || |||||||||||||| |||||||| || || ||| | |||
Sbjct 70212 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 70271
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| |||| || || || || ||||| ||||| ||||||| ||||| |||||
Sbjct 70272 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 70330
>seq2574
Length=14985
Score = 147 bits (162), Expect = 5e-30
Identities = 147/191 (77%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || |||||||||||||| || || || || || || |||
Sbjct 3 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATC 62
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || || ||||| || |||||||||||||| |||||||| || || || | |||
Sbjct 63 AGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG 122
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091
|| ||||| || | ||||| || |||||||| ||||| || || | ||||| |||||
Sbjct 123 ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAG 182
Query 283092 ATCTGCATTTT 283102
|||||||| ||
Sbjct 183 ATCTGCATCTT 193
>seq3478
Length=17986
Score = 105 bits (116), Expect = 1e-17
Identities = 163/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAAT 230237
||||| | ||| ||||||||| | ||| || | || || || |||||||||||
Sbjct 8482 GTTGCCATTGAGAAGGAGTTCCTGACCGAGGCCTTGCCCTGTGCCCTGCTCGGCATGAAT 8541
Query 230238 GCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGG 230297
|| | | ||| ||| || ||||||||||| || || ||| | |||| || || ||
Sbjct 8542 GCCAACTTGATGAAGCAGTACATCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGC 8601
Query 230298 TACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAG 230357
||||||| | || || || | ||||| |||| || |||||| ||| || ||
Sbjct 8602 AACGAGAAGATCTACAAGTCTACTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGC 8661
Query 230358 GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||| || ||||||||||| |||||||| | || || || | | | |||||
Sbjct 8662 GGGAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGT 8714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046653166215410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |