Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq373 150 4e-31
seq6049 147 5e-30
seq2574 136 1e-26
seq1214 132 1e-25
seq638 98.7 2e-15
>seq373
Length=59380
Score = 150 bits (166), Expect = 4e-31
Identities = 157/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || || ||||||||||||||||||||| || ||
Sbjct 45 CAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCGGAT 104
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || |||||||| ||||| || || || || || ||||||||
Sbjct 105 ACGATCGACAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAGCAG 164
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || ||||| ||||| || |||| || | || || ||| ||
Sbjct 165 CGTCTTATCTTCGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAACATC 224
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || |||||||| ||||
Sbjct 225 CAGAAGGAGTCGACACTGCA-CTTG 248
>seq6049
Length=106314
Score = 147 bits (162), Expect = 5e-30
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|||||||| || || || || || || |||||||| |||||||| || |||||||||
Sbjct 70330 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 70271
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| |||||||| ||||| |||||||| || || ||||||||||| || || ||| |
Sbjct 70270 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAACAGCGATTG 70211
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||||||||| || ||||| || ||||| | |||||| |||| || ||| |||| ||
Sbjct 70210 ATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 70152
>seq2574
Length=14985
Score = 136 bits (150), Expect = 1e-26
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || ||||| || ||||| || ||| |||
Sbjct 187 CAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCTGAC 128
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || |||||||||||||||||
Sbjct 127 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAG 68
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || |||||||| ||||| | || || |||| || ||| ||
Sbjct 67 CGCCTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATC 8
Query 178104 CAAAA 178108
|| ||
Sbjct 7 CAGAA 3
>seq1214
Length=170273
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || |||||||| |||||||| || |||
Sbjct 100884 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 100825
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || || || || ||||| ||
Sbjct 100824 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAACAG 100765
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || |||||||| || || | || || |||| || ||| ||
Sbjct 100764 CGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAACATC 100705
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| || ||
Sbjct 100704 CAGAAGGAGTCCACCCTGCACCTGGT 100679
>seq638
Length=259535
Score = 98.7 bits (108), Expect = 2e-15
Identities = 185/271 (68%), Gaps = 6/271 (2%)
Strand=Plus/Minus
Query 214123 CCAAAGTTTTTCTGGTTGCTTTTGCGGCAAATGGC---ATCTTTGTATGCGATGAAAGGC 214179
|||| ||| ||||||||||| |||||| |||| ||| ||||| ||||| ||
Sbjct 6909 CCAAGGTTCTTCTGGTTGCTCTTGCGGT---TGGCGTGATCCTTGTACAACATGAAGGGG 6853
Query 214180 ATTCCCACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACC 214239
| || |||| |||||| | || ||| || |||||| | || ||||||| | |
Sbjct 6852 TTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAGGGTC 6793
Query 214240 TTTTTGGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAG 214299
|||| | | | |||||| |||||||| || || |||| ||| || ||| ||||||
Sbjct 6792 TTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAG 6733
Query 214300 ACATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTG 214359
|| |||| ||||| |||||||||||| | ||| |||| | || || | |
Sbjct 6732 CAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTCT 6673
Query 214360 ACTCTTTTCATGAAAAGGTCGGAAGTCCAGA 214390
|| | |||||||| || || | ||||||
Sbjct 6672 ACACGCTTCATGAAGAGATCCGGGATCCAGA 6642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203632262699510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |