Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20austroafricana_20[genbank_20GCA_5F001051155.1_202015-
07-09] 6,415 sequences; 44,668,886 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1214 170 2e-37
seq2574 131 2e-25
seq373 129 5e-25
seq6049 118 1e-21
>seq1214
Length=170273
Score = 170 bits (188), Expect = 2e-37
Identities = 177/230 (77%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| ||||| ||| ||||||||| ||||| |||||||||
Sbjct 100661 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 100720
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| |||||||||||||| ||||| ||||||||||||||||| | ||||
Sbjct 100721 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGA 100780
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| | |||||||||| ||| || ||| || | || | |||||| |||||||
Sbjct 100781 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCGGAAGACTCCA 100838
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || || || || ||||| || ||||| ||||| |||||||||
Sbjct 100839 CCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 100888
>seq2574
Length=14985
Score = 131 bits (144), Expect = 2e-25
Identities = 147/195 (75%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| ||||||||||||||||| | || |||||||||||||| ||||| |
Sbjct 1 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAA 60
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
|||||||||| ||||||| || | | |||||||||| ||| || ||| || |
Sbjct 61 TCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 120
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | ||||| ||||| ||||| | || || || || || || || ||||| ||
Sbjct 121 CG--ATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 178
Query 41851 GAAAATCTGCATGTT 41865
||| |||||||| ||
Sbjct 179 GAAGATCTGCATCTT 193
>seq373
Length=59380
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| ||||| || ||||||||| ||||| ||||| ||
Sbjct 268 CCACCACGCAGACGCAGCACCAAGTGCAGTGTCGACTCCTTCTGGATGTTGTAGTCAGAC 209
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || ||||||||||| ||||| || || ||||| ||||| | ||||
Sbjct 208 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 149
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||| | ||| | || || | ||| | | | || || || |||||
Sbjct 148 ATACCCTCCTTGT-CTTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCAC 90
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || ||||| || |||||||| ||||| ||||| || |||||
Sbjct 89 CTCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 42
>seq6049
Length=106314
Score = 118 bits (130), Expect = 1e-21
Identities = 137/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||||| || ||||| | || || ||||||||||||||||| |
Sbjct 70150 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 70209
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
||| |||||||| |||| || | | |||||||||| || | || || | ||| |
Sbjct 70210 TCAATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTG 70268
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||| ||||||||||| | || || || || |||||||| ||||| |||
Sbjct 70269 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACG 70328
Query 41852 AA 41853
||
Sbjct 70329 AA 70330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462266928998000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |