Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq86 165 2e-35 >seq86 Length=153077 Score = 165 bits (182), Expect = 2e-35 Identities = 284/406 (70%), Gaps = 10/406 (2%) Strand=Plus/Plus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 ||||||| |||||| ||| ||| ||||||||||||| | || ||||| ||| Sbjct 136282 CCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCA 136341 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTA-TGTATTCAAAGCTCCAG 230355 || ||| ||||||||||| || | |||| | |||| ||| ||| | || | Sbjct 136342 TCTCTCGTGACGAGGGTCTGCACACTGACTTCGCCT-GCTTGCTGTTCTCACACCT---G 136397 Query 230356 AACAAGCTACCATTCGAGACG---GTCAAACAAATCATTACAGAAGCAGTTGAAAACGAA 230412 ||||| | || | || | || || |||||||| || || |||| | || Sbjct 136398 AACAACCGCCCCAGCAAGCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGCCATTGAG 136457 Query 230413 AAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTT-AT 230471 ||||||||| | || || | || ||| ||| | |||||||| || ||||| || Sbjct 136458 AAGGAGTTCCTGACCGAGGCCTTGCCGTGTGCCCTGCTCGGCATGAATGCC-AACTTGAT 136516 Query 230472 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGT 230531 | ||||||||||||||||| |||||||| | | || || || || ||||||| | Sbjct 136517 GAAGCAGTACATCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGCAACGAGAAGAT 136576 Query 230532 GTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591 ||||| |||| ||||| || | || |||||| ||| || ||| ||||||||||| Sbjct 136577 CTACAAGTCTACTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGGAAGACCAA 136636 Query 230592 CTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||| |||||||| ||||||| |||| | ||||||| ||| Sbjct 136637 CTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGTCATG 136682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057811070085020