Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq104 91.5 1e-13 >seq104 Length=128129 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || |||||||||| || || ||| ||| |||| | | Sbjct 59655 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 59596 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | | | | ||| || ||| || || || ||| | ||| ||| || Sbjct 59595 GATACGATCGACAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 59536 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | |||||||| |||||||| || |||||||| | || || | || ||||| Sbjct 59535 CAGCGTCTTATCTTCGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAAC 59476 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||||||||||| || || || ||| ||||| | || | || || ||| Sbjct 59475 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGG 59428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428331019790870