Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq121 167 3e-36 >seq121 Length=115632 Score = 167 bits (184), Expect = 3e-36 Identities = 279/401 (70%), Gaps = 2/401 (0%) Strand=Plus/Minus Query 145869 CACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCG 145927 |||||||||||| ||| | | |||||| |||||||| |||||| ||||||| | Sbjct 106186 CACGTAGAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGG 106128 Query 145928 GGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCA 145987 ||||||| ||| | |||| || || || | | |||||| || || || | | Sbjct 106127 GGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGGAGCTTGTGCACGA 106068 Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047 ||| |||||||| |||||||| || ||| || | | ||| |||||| ||| Sbjct 106067 CCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTCGG 106008 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107 | |||||||||| ||||||||||||||| ||||| || ||||| || || | |||| Sbjct 106007 CGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCGTCGCGGTGCG 105948 Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCC 146167 |||| || | | | | ||||| | || || |||||| ||||||| |||||||||||| Sbjct 105947 CCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGCCCT 105888 Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227 |||| |||| || ||| | ||| | ||||||||| ||||| | || | Sbjct 105887 GCGCGCTGAGCGGCAGCGACGACGTCGCGCCCGACACGAACCAGAGGAGCTCGGCCAGCA 105828 Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 146268 || ||| ||| || | |||||| || ||||| ||| || Sbjct 105827 CCGCCCGGTGGAACACGCGCTTGGTCGTGAGCAGCGGGTAC 105787 Score = 154 bits (170), Expect = 2e-32 Identities = 233/322 (72%), Gaps = 17/322 (5%) Strand=Plus/Minus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599 |||| ||||| ||||| ||| | | ||| |||| || |||| || | ||||||||||| Sbjct 106611 ACCGACATCTTCATGGCGATCGTCTTGTGCGGGTCATACCCCTTCACCACAAAGTCCTCC 106552 Query 145600 ---GCCCTGAAGTCATCTATGTCCTCCACCCGCCTCA----GGATCCTGAGC-CTGGGAA 145651 |||| | | || ||| | || |||| ||| ||||| ||| | ||||| Sbjct 106551 AGCGCCC---ACCCGTCGATG-CTGCCGCCCGTCTCCCGCCGGATCTCCAGCTCCGGGAA 106496 Query 145652 AGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACG 145710 || | |||||| | || ||||| | |||| | |||||||||| | ||||||| Sbjct 106495 CTCGC--GCGGCTCCCGCTCCAGCTGCGTCCTCAGCGCGTCCACGTGGTCCACGTAGACG 106438 Query 145711 TGCGCGTCCCCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGGGCGAC 145769 |||||||| |||| |||||| | | | | |||||| ||||| | | ||| |||| Sbjct 106437 TGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGA-CGAGGTCGCACACGTGCGCGAT 106379 Query 145770 CATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCC 145829 ||||| |||||||| | ||||||||| |||||||| ||||| || || |||||||| | Sbjct 106378 CATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGTCGCA 106319 Query 145830 CGAGCGCTGGTACAGCTGGCAG 145851 || |||||||||||||||||| Sbjct 106318 GGACCGCTGGTACAGCTGGCAG 106297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590069763334160