Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq86 190 2e-43 seq42 149 6e-31 seq104 147 2e-30 seq8 109 6e-19 >seq86 Length=153077 Score = 190 bits (210), Expect = 2e-43 Identities = 320/457 (70%), Gaps = 7/457 (2%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||| | |||||| | | | ||| | ||| || |||||| Sbjct 136171 AGAAGGCCGACTGGGCTCTGAGGTGGATCCAGGACCGTGAGTCTACCTACGCTCAGCGCC 136230 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || || || || || ||||| || | ||||| ||| |||||| |||| || | Sbjct 136231 TTGTTGCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGCGCTTTCGCTTCCATCTTCT 136290 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| || || || ||||| |||||||| ||| |||||| |||||||| | | Sbjct 136291 GGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATCTCTCGTG 136350 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||||||||| ||||| ||||| ||||||||| || || | || || | Sbjct 136351 ACGAGGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTCACACCTGAACAACCGCCCCA 136410 Query 117222 GCGCGGCGCGCGTCAGGGAG--ATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCT 117279 || | |||||| || || ||| | ||||| || || ||||| ||| || ||||| Sbjct 136411 GCAAGCAGCGCGT--GGAAGCCATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCT 136468 Query 117280 CACCGAAGCGCTGCCG-GTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACA 117338 ||||| || ||||| |||| ||||| || | ||| | | |||| ||| |||| Sbjct 136469 GACCGAGGCCTTGCCGTGTGC-CCTGCTCGGCATGAATGCCAACTTGATGAAGCAGTACA 136527 Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398 |||| |||||||||||| | || || ||| || | | || ||| |||||| | Sbjct 136528 TCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGCAACGAGAAGATCTACAAGTCTA 136587 Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCT-CCTTGG 117434 | ||||| | ||||| ||| | ||||| |||||| Sbjct 136588 CTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGG 136624 Score = 150 bits (166), Expect = 2e-31 Identities = 188/257 (73%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| ||||||||| |||||||||| |||||| | |||||| Sbjct 135765 ATTTGGCAAATGTACAAGAAGCACGAGGCGTCCTTCTGGACCGCTGAGGAGATTGACCTG 135824 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | ||||||| | || |||| ||| ||||| | |||||| Sbjct 135825 TCTAAGGACCTGCACGACTGGAACAACCGTTTGACCGATGACGAGAAATACTTCATCTCC 135884 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || ||||| || ||||| ||||||||||| ||||| || || ||||||| Sbjct 135885 CACATCCTCGCCTTCTTTGCCGCTTCGGACGGCATCGTTAACGAAAACTTGATCGAGCGC 135944 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | ||||| ||| | | ||||| || || ||||||||||| |||| | ||| Sbjct 135945 TTCAGTGCTGAGGTCCAGATTCCTGAGGCCCGTTGTTTCTACGGCTTCCAGACCATGATG 136004 Query 116873 GAGAACGTGCACTCGGA 116889 |||||| | ||||| || Sbjct 136005 GAGAACATCCACTCCGA 136021 >seq42 Length=213763 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | || Sbjct 68052 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 68111 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| ||||| || ||| | ||||| Sbjct 68112 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAA 68171 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| || |||||| |||||||||| Sbjct 68172 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 68231 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||| ||||| || || ||||| || | || || Sbjct 68232 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGG 68278 >seq104 Length=128129 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| |||| || || | || Sbjct 59883 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCC 59824 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| ||||| ||||| |||| || Sbjct 59823 GACACCATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCA 59765 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || |||| ||||| || ||||||||| Sbjct 59764 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAA 59705 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||||||| || || || Sbjct 59704 CATCCAGAAGGAGTCCACGCTCCACCTTGT 59675 Score = 145 bits (160), Expect = 8e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||| ||||| |||||||| | || ||||| || Sbjct 60114 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCC 60055 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||||| || || | ||||| ||||||||||| ||||| Sbjct 60054 TCTGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGAC 59995 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || || | ||| || || ||||| || || | ||||||||| ||||||| Sbjct 59994 CAGCAGCGCCTGATTTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 59935 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||| | ||||| || || || | || || | ||||| Sbjct 59934 AACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTGCGTGGCGG 59885 Score = 140 bits (154), Expect = 3e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || |||||||| || |||||| |||| || ||| | | Sbjct 59655 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 59596 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| | |||| || |||| ||||| ||||| || ||| | ||||| Sbjct 59595 GATACGATCGACAACG-TGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCA 59537 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||||||||| |||||||| |||| || || || |||||||| Sbjct 59536 GCAGCGTCTTATCTTCGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAA 59477 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||||||| | |||||||| | ||| |||| Sbjct 59476 CATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCG 59441 >seq8 Length=406722 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| || |||||| | || || || | |||||| | | Sbjct 173631 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATC 173690 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| |||||| || || | ||||| ||||| ||||| |||| || || ||| | Sbjct 173691 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAACAGCGATT 173749 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | ||||| || |||||||||||||||||| Sbjct 173750 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 173809 Query 40878 GG 40879 || Sbjct 173810 GG 173811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515213056011040