Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq24 114 3e-20
seq17 91.5 3e-13
>seq24
Length=263348
Score = 114 bits (126), Expect = 3e-20
Identities = 270/403 (67%), Gaps = 30/403 (7%)
Strand=Plus/Plus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
|| |||||| |||| ||| |||| || || || || |||||||| || || ||||| ||
Sbjct 207745 CTGCCTCATATGCTCTTCTACGGCCCACCTGGGACCGGCAAGACCTCTACGATCCTCGCC 207804
Query 254061 CTGGCCC--GAACCCTGTTGGGCGAGGGGAA--CATGAGAGAGCGCGTGCTCGAGCTGAA 254116
|| ||| || | || || | ||| ||||| ||||||| |||||||||||
Sbjct 207805 CTCGCCAAGGAGCTCTACGGGCCC----GAATTCATGAAGCAGCGCGTCCTCGAGCTGAA 207860
Query 254117 CGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAG-ACTTT-CTC-CA- 254172
|||||| ||||| ||||| | | | ||||| || || ||||| ||||| | | ||
Sbjct 207861 CGCTTCGGACGAGCGCGGCATCTCCATTGTCCGAGAGAAAGTCAAGGACTTTGCGCGCAT 207920
Query 254173 --AGATGTCGATTTCGTCGTTC--------------CAACCCGGCTGTCCGCCTTTCAAG 254216
|| || ||| | | || | | |||| ||| ||||| |||||
Sbjct 207921 GCAGCTGACGAGTCCCCCGCCCGGCTATAAGGACCGCTACCC--CTGCCCGCCCTTCAAA 207978
Query 254217 CTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGA 254276
|| | || || |||||||| || | |||||| || |||||| || || ||||||
Sbjct 207979 ATCATCATTCTAGACGAGGCCGATAGCATGACACAGGATGCGCAGAGTGCGCTGCGCCGA 208038
Query 254277 ACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAG 254336
||||| ||||| || | | ||||| || || ||| | ||||||||||| ||
Sbjct 208039 ACGATAGAGACATACAGCAAGATCACGCGATTCTGTCTGATTTGCAACTACGTCACGCGC 208098
Query 254337 ATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
||||| | |||||||| | ||| |||||| |||||||
Sbjct 208099 ATCATTGATCCGCTGGCGAGCAGATGCAGCAAGTTCCGATTCA 208141
>seq17
Length=322637
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076
|| |||| ||||| || ||||| ||||| || |||||||| || || || || | | |
Sbjct 70949 TCTACGGCCCTCCAGGTACAGGGAAGACTTCCACCATCCTCGCCCTCGCTCGCCGCATCT 70890
Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136
|| | | ||||||| | || |||||||||||||| ||||| ||||| || ||
Sbjct 70889 ATGGAGCCGAGAACATGCGCCAGATGGTGCTCGAGCTGAATGCTTCCGACGACCGTGGCA 70830
Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTTCTCC 254171
| ||||| || ||||| |||| ||||| ||| ||
Sbjct 70829 TCGACGTAGTGCGCGAACAGATTAAGACGTTCGCC 70795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073753275219072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |