Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq104 125 6e-24
seq42 123 2e-23
seq8 114 1e-20
>seq104
Length=128129
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||||||||| ||||||||||||||||||||| ||| || |||| |||
Sbjct 59447 ACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTCCGGCCGTCTTCC 59506
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| || | ||||| ||||| || || | |||||||||||| |
Sbjct 59507 AGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGA 59566
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||| |||||||| | ||| |||||||||
Sbjct 59567 ATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATCGTCTTG 59626
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||| ||||| || |||||||||||
Sbjct 59627 CCCGTCAGGGTCTTGACGAAGATTTGCAT 59655
Score = 120 bits (132), Expect = 2e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| |||||| ||||||||| |||||||||||| ||| ||| |||| || || ||
Sbjct 59680 GTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCAAGCTG 59739
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
||||||||||| || | ||||| || || ||||| | ||||||||||||| || ||
Sbjct 59740 CTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTT 59799
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| ||||||||| | ||| || |||||||| ||
Sbjct 59800 GGCCTTCACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 59859
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
|||||||| || ||||| |||||
Sbjct 59860 GAGAGTCTTGACGAAGATCTGCAT 59883
>seq42
Length=213763
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| ||| ||||||||| |||||||||||| || || |||| ||
Sbjct 68260 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCG 68201
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| ||||||||||| || || | |||||||||||||
Sbjct 68200 AGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGG 68141
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| || ||||||
Sbjct 68140 ATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTG 68081
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
||||| || ||||| || ||||| |||||| ||
Sbjct 68080 CCCGTGAGGGTCTTGACGAAGATCTGCATGATG 68048
>seq8
Length=406722
Score = 114 bits (126), Expect = 1e-20
Identities = 137/186 (74%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206
||||||| |||||||||||| || ||| | || || || || || |||||||| |
Sbjct 173811 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 173752
Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266
|||| |||||||| || ||||| | ||||||||||||| || || ||| ||
Sbjct 173751 TCAATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 173692
Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326
| | | |||| | ||||||||| | ||| || |||||||||||||| |||||||| |
Sbjct 173691 CGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 173632
Query 45327 AGATTT 45332
|| |||
Sbjct 173631 AGCTTT 173626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395070606510034
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |