Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq50 324 1e-83
seq86 120 3e-22
seq104 113 4e-20
seq42 89.7 5e-13
>seq50
Length=202051
Score = 324 bits (358), Expect = 1e-83
Identities = 1233/1904 (65%), Gaps = 52/1904 (3%)
Strand=Plus/Minus
Query 22105 CTTGTCCACTGTAAACTGTAT-GGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163
|| ||| ||||| ||||| || |||| | || || | | ||||| || || |||||||
Sbjct 89646 CTGGTCGACTGTGAACTGAATCGGCGCT-GCCGCTGCCTGTGTGCGGAGGTAGTACATGC 89588
Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223
| ||||| ||||||| |||||| || || || || || | || || | |
Sbjct 89587 CAGTCTTGAGACCCAGCTTCCAACCGGTGAAGTGCATGCTAGTGATCTTGCCCATAGAAG 89528
Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283
|| ||||| | || | |||||| ||| ||||| || || || |||||||| |
Sbjct 89527 GCTCACGCATGTGTATGTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAG 89468
Query 22284 CCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343
|||| | | | || | | ||| || ||||| ||||||||||| || | |||| |
Sbjct 89467 CCATCTGCACGATGGTCCTCTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGT 89408
Query 22344 CTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402
| || || | | ||| | |||||| || || | | ||||| || ||
Sbjct 89407 CATCTGGGAT-GCTGCGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTC 89349
Query 22403 ATCGTATCGTTCCACAAACCG-ATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCACC 22459
| || ||||| ||| | || || ||| |||| ||| ||| | || ||
Sbjct 89348 AGGTCCTCAGACCACAGACCACACTGCAC-CAGATCCTTGAGCAGCCATG--GATTGACA 89292
Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519
||||| |||||||| | | |||||||| || || ||||||||||| | || || ||
Sbjct 89291 ACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGGGCTCAAAG 89232
Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579
| || ||||| ||||| ||||| | ||||| || || ||||| ||||||| || |
Sbjct 89231 CACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAG 89172
Query 22580 GAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGA--GCATCGACCAGTCCCACAG 22635
||| | | ||||||| |||| | || ||| | || || ||||||||| ||
Sbjct 89171 CTGTTGCGGACACCGTGCTGCTTGA--TCTTGGCCTTCAAGGCGTC--CCAGTCCCAGAG 89116
Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCGGG 22693
||| || ||| | ||||||| |||||| ||||| |||| | || | | || || | |
Sbjct 89115 ATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGG-GAG 89057
Query 22694 CTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAAC 22753
| ||| |||| | | ||| || |||| | | ||||| || || || |
Sbjct 89056 ATCCCT-CGTATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGG 88998
Query 22754 GCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCT 22809
||| ||| || || ||||||||||| | |||||||| || || || |||
Sbjct 88997 GCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTGAC--- 88941
Query 22810 TTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGAT 22869
||| | ||||| || | || ||| || || |||| |||||| ||||| | || ||
Sbjct 88940 -TCGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAAT 88882
Query 22870 CGGTCGGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAATTCGAATCG 22927
|| |||| || || | ||| | |||| || | |||||| || ||||
Sbjct 88881 AGGACGGTGGCGCATGTTG--CTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCG 88824
Query 22928 ATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCG 22987
|| | |||||| ||| | || | | || | | ||||
Sbjct 88823 ATGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGTTA 88764
Query 22988 TAAACGCCCGATT---GTA--CAACAAACTTGTTG-ACGGCGATCGAGGCAAGATTGCAT 23041
|| ||| | ||| ||| | || |||| || | | |||||| || || || |||||
Sbjct 88763 TAG-CGCTC-ATTCTCGTAGTCGACGAACT-GTGGCAGGGCGATAGACGCCAGGTTGCAG 88707
Query 23042 ACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT 23101
|| || ||||| || | | ||||| | || || || || || ||| |
Sbjct 88706 ACAGCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGA 88647
Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161
|| ||||| | || |||||||||| || || ||| ||||||||| | |||| |
Sbjct 88646 ATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAG 88587
Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221
|| |||| |||||| || | ||||| ||| || ||| | |||| || | |
Sbjct 88586 GGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAGG 88527
Query 23222 CGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACC 23280
||| | | | || || ||||||||| | ||||| || || || || | ||
Sbjct 88526 -GTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCC 88468
Query 23281 GTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT 23340
||| |||||||| |||||||| | | | || ||||| ||| |||| || ||
Sbjct 88467 GTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTT 88408
Query 23341 TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400
|| || || |||| || |||||||| ||||| || || ||| || || || || ||
Sbjct 88407 CTCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACG 88348
Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460
||||| || || ||| |||||| || || | || || || || || || |||||
Sbjct 88347 GACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCA 88288
Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520
||||| ||||| | |||||| || || || | ||||||||| |||||||||||||| ||
Sbjct 88287 TGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCG 88228
Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580
||| ||||||||| | || | | ||| || | || || ||||||| |||| |||
Sbjct 88227 GGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCC 88168
Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
|| | || || | || || | | ||| |||| || || |||||||| ||
Sbjct 88167 AGCGATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCTCCAGCCAT 88108
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||| || || ||||| || || ||||||||||| ||||||||||| ||
Sbjct 88107 CTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTT 88048
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| | || | ||| ||||| |||| ||||| | ||||| |||| |||||| ||
Sbjct 88047 CATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGT 87988
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCAT 23819
|| ||||| || ||| | || ||||| ||| ||||| || || | | |
Sbjct 87987 TGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCAAGAACCCTCT 87929
Query 23820 CAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGA 23879
| |||| || || || || | ||||| ||||||| ||||| || || | |||||
Sbjct 87928 CGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGA 87869
Query 23880 C--CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937
| | | | ||||| | ||||| ||||| ||||| | | || || || ||||| ||
Sbjct 87868 CGACTTTA--CCGTTGAGTTTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCAAAGTA 87811
Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAAC 23981
| ||| | |||| ||||| | || || || ||| ||||||
Sbjct 87810 TTGATATTGGTAGTCGCGATCATAGACAATAGCAGAA-TCAAAC 87768
>seq86
Length=153077
Score = 120 bits (132), Expect = 3e-22
Identities = 214/310 (69%), Gaps = 2/310 (1%)
Strand=Plus/Plus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAATATTTTGGAT 58039
|| || || || ||||||||||| ||||| ||| ||||| || | || || ||| |
Sbjct 136236 GCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGC-GCTTTCGCTTCCATCTTCTGGCT 136294
Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099
|||||| || || |||||||| |||||||| || |||||| | || || || |||||
Sbjct 136295 GAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCATCTCTCGTGACGA 136354
Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCG 58159
|||||| || ||||| || || ||| | ||| ||| ||| | ||| || |
Sbjct 136355 GGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTCACACCTGAACAACCGCCCCAGCAA 136414
Query 58160 GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGA 58219
| | ||| | | ||| || ||||| || || || || || || ||||| | |||||
Sbjct 136415 GCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGCCATTGAGAAGGAGTTCCTGACCGA 136474
Query 58220 AGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTT 58279
||| | ||| ||| ||||||| ||||| | |||||| ||||||| || ||
Sbjct 136475 GGCCTTGCCGTGTGCCCTGCTCGGCATGAATGCCAACTTGATGAAGCAGTACATCGAATT 136534
Query 58280 TGTTGCCGAC 58289
|| ||||||
Sbjct 136535 CGTCGCCGAC 136544
>seq104
Length=128129
Score = 113 bits (124), Expect = 4e-20
Identities = 170/239 (71%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| ||||| ||||| ||||||||| |||| || ||| | ||
Sbjct 59655 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACCCTCGAGGTGGAATCATCG 59596
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || | || |||||||| || | || || ||||||
Sbjct 59595 GATACGATCGACAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 59536
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| ||||| ||| |||||||| ||| || || || |||
Sbjct 59535 CAGCGTCTTATCTTCGCGGGCAAGCAGCTGGAAGACGGCCGGACGCTGTCTGACTACAAC 59476
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAG-GGGCGGTAG-AAGCGGT 31429
||||| || || ||||| || || |||| || | ||| | || || || |||||||
Sbjct 59475 ATTCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGGGCAGTAAGCGGT 59417
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || ||||| || |||||| |||| || || |||||
Sbjct 59883 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCC 59824
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||| || | || || || |||
Sbjct 59823 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAG 59764
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| || || ||| | || ||| ||| || ||| || |||
Sbjct 59763 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAAC 59704
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || || || || || || || ||
Sbjct 59703 ATCCAGAAGGAGTCCACGCTCCACCTTGTCCT 59672
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/232 (68%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| ||||| || || ||||| || ||||| | || || || |
Sbjct 60114 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCC 60055
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | ||||| | || ||||||||| ||| | || || |||
Sbjct 60054 TCTGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGAC 59995
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| || || |||||||| || ||| | || || || | ||| ||
Sbjct 59994 CAGCAGCGCCTGATTTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 59935
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || || ||||| || || || || || | ||| | |||||||
Sbjct 59934 AACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTGCGTGGCGGTA 59883
>seq42
Length=213763
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || ||||| || |||||| | || || || | ||
Sbjct 68051 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTC 68110
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| |||| | ||||| | || ||||||||| || | || || |||||
Sbjct 68111 CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 68170
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||| || || ||||||||||| ||| | || ||| || | ||| || ||
Sbjct 68171 ACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAA 68230
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||| || || || || || || || ||||| || | ||| | || |||
Sbjct 68231 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGGT 68279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445761084235680
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