Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq50 129 7e-25
seq86 122 1e-22
>seq50
Length=202051
Score = 129 bits (142), Expect = 7e-25
Identities = 372/567 (66%), Gaps = 14/567 (2%)
Strand=Plus/Minus
Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293
|| ||||||| | ||| || |||| | || || || ||||| |||||||| || |||
Sbjct 88436 GGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGAAGAGATCCGGGATC 88377
Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353
|| || || | || || || | | | || || ||||| ||||| ||
Sbjct 88376 CAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGG 88317
Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413
||||||||| | | | ||||| ||||| || |||| ||| ||||| | | | || ||
Sbjct 88316 TCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGG 88257
Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473
|| || || || |||||||| | ||||| || ||||| || | || | |||||| ||
Sbjct 88256 CGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGG 88197
Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533
|| || || || || | || ||||| || | ||| ||| || ||||||| ||
Sbjct 88196 ATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGG 88137
Query 63534 CTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63591
| |||| | || || || || ||||| || ||||| | || || || | |
Sbjct 88136 TGGACGTTGA--GGCCAATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGG 88079
Query 63592 TGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63651
| ||||||||||| || ||||| || || |||||| || || || || |||| |
Sbjct 88078 TATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACT 88019
Query 63652 GGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 63711
| ||| || || ||||| || | || || || ||||| || || | || | |
Sbjct 88018 GCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGG 87959
Query 63712 A-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT----CCCATTGATGAATTCCTAC 63766
| | |||| ||||| ||||||| | | || || | ||| |||| || ||
Sbjct 87958 ACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCAGATG----CCAAC 87904
Query 63767 TGCGACACGCATTAACATGTGCTGAGG 63793
||||||||||| | ||||||||| ||
Sbjct 87903 AGCGACACGCATCAGCATGTGCTGTGG 87877
>seq86
Length=153077
Score = 122 bits (134), Expect = 1e-22
Identities = 158/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| ||| || ||||| || ||||||||||||||| | | || | |||||| ||
Sbjct 136387 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 136328
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| || || || ||||| || |||||||| || ||||| || ||||||||||| | ||
Sbjct 136327 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 136268
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCG 33749
||||| || ||||| || |||||||| |||| ||| | || | || | |
Sbjct 136267 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 136208
Query 33750 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33787
| ||| || |||||| | ||||||| |||||||||||
Sbjct 136207 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 136170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629810089425120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |