Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq50 136 5e-27
seq86 122 1e-22
>seq50
Length=202051
Score = 136 bits (150), Expect = 5e-27
Identities = 380/578 (66%), Gaps = 14/578 (2%)
Strand=Plus/Minus
Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086
|| ||||||| | ||| || |||| | || || || ||||| |||||||| || |||
Sbjct 88436 GGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGAAGAGATCCGGGATC 88377
Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146
|| || || | || | || | | | || || ||||| ||||| ||
Sbjct 88376 CAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGG 88317
Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206
||||||||| | | | |||| ||||| || |||| ||| ||||| | | | || ||
Sbjct 88316 TCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGG 88257
Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266
|| || || || |||||||| | ||||| || ||||| || | || | |||||| ||
Sbjct 88256 CGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGG 88197
Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326
|| || |||||||| || || ||||| || | ||| ||| || | ||||| ||
Sbjct 88196 ATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGG 88137
Query 66327 CTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384
| |||| | || || || || ||||| || ||||| | || || || | |
Sbjct 88136 TGGACGTTGA--GGCCAATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGG 88079
Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444
|||||||||||||||| || || || ||| |||||| || || || || |||| |
Sbjct 88078 TATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACT 88019
Query 66445 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 66504
| || || || ||||| || | || || || ||||| || || | || | |
Sbjct 88018 GCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGG 87959
Query 66505 A-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT----CCCATTGATGAATTCCTAC 66559
| | |||| ||||| ||||||| | | || || | ||| |||| || ||
Sbjct 87958 ACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCAGATG----CCAAC 87904
Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 66597
||||||||||| | ||||||||| || | || ||||
Sbjct 87903 AGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGA 87866
>seq86
Length=153077
Score = 122 bits (134), Expect = 1e-22
Identities = 158/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208
|||| ||| || ||||| || ||| ||||||||||| | | || | |||||||||
Sbjct 136387 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 136328
Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268
|| || || || ||||| || |||||||| || ||||| || ||||| || || | |||
Sbjct 136327 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 136268
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCA 36325
|||||||| ||||| || || ||||| |||| ||| | || | || | ||
Sbjct 136267 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 136208
Query 36326 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 36363
| ||| || |||||| | ||||||| |||||||||||
Sbjct 136207 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 136170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658164951289360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |