Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq121 123 2e-23 >seq121 Length=115632 Score = 123 bits (136), Expect = 2e-23 Identities = 218/309 (71%), Gaps = 9/309 (3%) Strand=Plus/Minus Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 |||||| ||||| | |||| | ||| || || || || ||||| | |||||| || Sbjct 106186 CACGTAGAACTG-CGCAAACATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGG 106128 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGTTAATTAGATCCAC 21226 |||||||||||| || | ||| ||||| |||| ||| || | | || | ||| Sbjct 106127 GGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGGAGCTT--GTGCAC 106070 Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286 || | ||||||||| || ||||| || |||||| ||| || | |||||| Sbjct 106069 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 106010 Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTC 21346 || || || || | |||||||||||||||||| || || || ||||||||| ||||| Sbjct 106009 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCGTCGCGGTG 105950 Query 21347 CCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGC 21405 | | | |||| ||| | ||| || ||||| || |||| |||||||||| || |||| Sbjct 105949 CGCCAGGCCC-ACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGC 105891 Query 21406 CGCGGCGCG 21414 | | ||||| Sbjct 105890 C-CTGCGCG 105883 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936 |||| |||| ||| ||| ||||| || | |||||| | ||| | || ||| Sbjct 106512 ATCTCCAGCTCCGGGAACTCGCGCGGCTCCCGCTCCAGCTGCGTCCTCAGCGCGTCCACG 106453 Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCC 20996 |||| ||| ||||| ||||| |||| | |||| | | |||||| ||| | Sbjct 106452 TGGTCCACGTAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGACGAGGTCG 106393 Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 ||||| ||||||| | |||||| || ||||||||||||||||| ||||| || ||| Sbjct 106392 CACACGTGCGCGATCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCG 106333 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 |||||||||||| ||||| |||||||||||||||| Sbjct 106332 AGGCCCATGTCGCAGGACCGCTGGTACAGCTGGCAG 106297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427771026301920