Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq121 123 2e-23
>seq121
Length=115632
Score = 123 bits (136), Expect = 2e-23
Identities = 218/309 (71%), Gaps = 9/309 (3%)
Strand=Plus/Minus
Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168
|||||| ||||| | |||| | ||| || || || || ||||| | |||||| ||
Sbjct 106186 CACGTAGAACTG-CGCAAACATGTGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTTGG 106128
Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGTTAATTAGATCCAC 21226
|||||||||||| || | ||| ||||| |||| ||| || | | || | |||
Sbjct 106127 GGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGGAGCTT--GTGCAC 106070
Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286
|| | ||||||||| || ||||| || |||||| ||| || | ||||||
Sbjct 106069 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 106010
Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTC 21346
|| || || || | |||||||||||||||||| || || || ||||||||| |||||
Sbjct 106009 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCGTCGCGGTG 105950
Query 21347 CCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGC 21405
| | | |||| ||| | ||| || ||||| || |||| |||||||||| || ||||
Sbjct 105949 CGCCAGGCCC-ACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGC 105891
Query 21406 CGCGGCGCG 21414
| | |||||
Sbjct 105890 C-CTGCGCG 105883
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936
|||| |||| ||| ||| ||||| || | |||||| | ||| | || |||
Sbjct 106512 ATCTCCAGCTCCGGGAACTCGCGCGGCTCCCGCTCCAGCTGCGTCCTCAGCGCGTCCACG 106453
Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCC 20996
|||| ||| ||||| ||||| |||| | |||| | | |||||| ||| |
Sbjct 106452 TGGTCCACGTAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCCGGGACGAGGTCG 106393
Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056
||||| ||||||| | |||||| || ||||||||||||||||| ||||| || |||
Sbjct 106392 CACACGTGCGCGATCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCG 106333
Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092
|||||||||||| ||||| ||||||||||||||||
Sbjct 106332 AGGCCCATGTCGCAGGACCGCTGGTACAGCTGGCAG 106297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427771026301920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |