Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq121 107 1e-18
>seq121
Length=115632
Score = 107 bits (118), Expect = 1e-18
Identities = 142/193 (74%), Gaps = 3/193 (2%)
Strand=Plus/Minus
Query 25401 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCT 25460
||||||| ||| ||||| ||| |||||| || ||||| |||| ||||||||| |||||
Sbjct 106488 GGCTCCCGCTCCAGCTGCGTCCTCAGCGCGTCCACGTGGTCCACGTAGACGTGCGCGTCG 106429
Query 25461 CCCAGAGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGT 25519
|||| ||| | || || ||||| | || || |||| || ||||||| |||
Sbjct 106428 CCCATGACGTGCGTCAGGCTG-CCCGGGACGAGGTCGCACACGTGCGCGATCATGTGCGT 106370
Query 25520 GAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCT 25579
|| || ||||||||||||||| || || || |||| ||||||| | | |||| ||
Sbjct 106369 CAGCAGCGCGTAGCTGGCGATGTTGAACGGCACGCCGAGGCCCATGT-CGCAGGACCGCT 106311
Query 25580 GGTAGAGCTGACA 25592
|||| ||||| ||
Sbjct 106310 GGTACAGCTGGCA 106298
Score = 102 bits (112), Expect = 6e-17
Identities = 211/313 (67%), Gaps = 6/313 (2%)
Strand=Plus/Minus
Query 25611 CACGTAAAACTG---ACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTT 25667
|||||| ||||| | ||||| | |||||| || || || || | || ||| ||
Sbjct 106186 CACGTAGAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATGATCTTCAGGTCCTT 106130
Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGC 25727
|||||||| |||| || |||||| | || ||| | ||||| || || | | |
Sbjct 106129 GGGGTTCCACGCGCTCAGGATGATCCGCCGGTCGTACGGGTTCGTCCGGAGCTTGTGCAC 106070
Query 25728 GGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 25787
| | |||||| || || ||| || | |||||| || | | ||| ||||||
Sbjct 106069 GACCTCCGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCCGCGCGCGCGTCGACGTACTC 106010
Query 25788 TGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTG 25847
|| ||||| | || |||||||||||||||||| || || ||||| || || || | |||
Sbjct 106009 GGCGCCGAAGTGCCGCCACTGGAACCCGTACACGGGGCCGAGGTCGCCCTCGTCGCGGTG 105950
Query 25848 CTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCC 25907
| | | |||| | |||| || | | || || ||| ||||||| ||||| || ||
Sbjct 105949 CGCCAGGCCCACGCTGTCCAGGAACGCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGCC 105890
Query 25908 CTTCTCGGAGAGC 25920
|| | || ||||
Sbjct 105889 CTGCGCGCTGAGC 105877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340133645262642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |