Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq104 107 2e-18 >seq104 Length=128129 Score = 107 bits (118), Expect = 2e-18 Identities = 150/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 || || ||| |||||| || |||||||| || | || | || || ||||||| ||||| Sbjct 59681 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGC-CGTCCTCAAGCTG 59739 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || | || | ||||||||||||| || | || ||||||||| || || Sbjct 59740 CTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTT 59799 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||| | | | || ||||| |||| |||||| ||||| || ||||| || ||| Sbjct 59800 GGCCTTCACGTTGTCG--ATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCG 59857 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||| || || || |||||||| Sbjct 59858 GTGAGAGTCTTGACGAAGATCTGCAT 59883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421246302164954