Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq104 98.7 9e-16 >seq104 Length=128129 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| || ||| || |||| | ||||| ||||| |||||| Sbjct 59687 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCAAGCTGCTTTCCG 59746 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | |||||||| ||||| ||||| || ||||| | || || ||||| Sbjct 59747 GCGAAGATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTC 59806 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | ||| ||||| | || || || | |||||||| || || || ||||| Sbjct 59807 ACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTC 59866 Query 94991 TTCACAAAGATCTGCAT 95007 || || ||||||||||| Sbjct 59867 TTGACGAAGATCTGCAT 59883 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| || ||| | ||| | |||||| ||||| || || Sbjct 59915 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTACCA 59974 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | || || | | ||||| || ||||| || || || ||||| | || || |||||| Sbjct 59975 GCGAAAATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 60034 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | ||| ||||||| | ||||| |||| |||||||| || || || || || Sbjct 60035 ACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTC 60094 Query 94991 TTCACAAAGATCTGCAT 95007 || || ||||||||||| Sbjct 60095 TTGACGAAGATCTGCAT 60111 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||||||||| || || ||||| || | ||| || || || || | Sbjct 59441 CGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGACAGCGTCCGGCCG 59500 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||||||| || || | ||||| | | ||||| ||||| |||||||| || ||| Sbjct 59501 TCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTG 59560 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||| ||| | ||| || || | || || || | ||||| Sbjct 59561 TCTTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACCTCGAGGGTGATC 59620 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || || ||||| ||||| Sbjct 59621 GTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 59655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285854127440