Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq306 104 4e-18
seq40 95.1 2e-15
>seq306
Length=33052
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || |||||||| || ||||| ||||| || ||
Sbjct 31226 GCCAAGCGTCACCGGAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCCGCCAT 31284
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 31285 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 31325
Score = 86.0 bits (94), Expect = 1e-12
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 16570 CTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGAC 16629
|||||| || || |||| |||||| || ||| ||||||||||| || || |||||
Sbjct 31456 CTTCCTGGAGGGTGTCATCCGTGATGCCGTCACCTACACCGAGCACGCCAAGCGCAAGAC 31515
Query 16630 TGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTT 16689
||||||||| | || |||||||||| |||| || |||||||| | | || |||||
Sbjct 31516 CGTCACCTCCCTCGACGTCGTCTATGCCCTGAAGCGACAAGGCCGCACCCTCTACGGTTT 31575
Query 16690 TGGAAGTTAA 16699
|| |||||
Sbjct 31576 CGGTGGTTAA 31585
>seq40
Length=223668
Score = 95.1 bits (104), Expect = 2e-15
Identities = 83/101 (82%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | |||| || || || |||||||| || || |||||||| || ||
Sbjct 68777 GCCAAGCGCCACCGAAAGATC-CTCCGTGACAACATCCAGGGTATTACCAAGCCCGCCAT 68719
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 68718 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 68678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074327751122
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |