Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq86 134 2e-26
seq50 127 3e-24
>seq86
Length=153077
Score = 134 bits (148), Expect = 2e-26
Identities = 161/218 (74%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| ||| || ||||| || ||||||||||||||| | | || |||||||||||
Sbjct 136387 AACAGCAAGCAGGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGTTCGTTGGAG 136328
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| || || || ||||| || |||||||| || ||||| || ||||||||||| | |||
Sbjct 136327 AAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAAGCGAAAGCGCCA 136268
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCG 33471
||||| || ||||| || |||||||| |||| ||| | || | || | |
Sbjct 136267 CTGAAGAAAATACCTTCGACAGCAGCAAATGCAACAAGGCGCTGAGCGTAGGTAGACTCA 136208
Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509
| ||| || |||||| | ||||||| |||||||||||
Sbjct 136207 CGGTCCTGGATCCACCTCAGAGCCCAGTCGGCCTTCTT 136170
>seq50
Length=202051
Score = 127 bits (140), Expect = 3e-24
Identities = 378/578 (65%), Gaps = 14/578 (2%)
Strand=Plus/Minus
Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242
|| ||||||| | ||| || |||| | || || || ||||| |||||||| || |||
Sbjct 88436 GGGCACATCAGAGTCCAGTCGCCGTTCTTCTCTACACGCTTCATGAAGAGATCCGGGATC 88377
Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302
|| || || | || || || | | | || || ||||| ||||| ||
Sbjct 88376 CAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGG 88317
Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362
||||||||| | | | ||||| ||||| || |||| ||| ||||| | | | || ||
Sbjct 88316 TCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGG 88257
Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422
|| || || || |||||||| | ||||| || ||||| || | || | |||||| ||
Sbjct 88256 CGCTTATTGCCACCCTGATCGACGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGG 88197
Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTA 63482
|| || || || || | || ||||| || | ||| ||| || ||||||| ||
Sbjct 88196 ATGATGCCATTGGACGTGCCGTTGGTGCCAGCGATGTAGGAGCCGGTGGCACGGATGCGG 88137
Query 63483 CTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63540
| |||| | || || || || ||||| || ||||| | || || || | |
Sbjct 88136 TGGACGTTGA--GGCCAATGCCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTCAGGG 88079
Query 63541 TGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63600
| |||||||| ||||| ||||| || || |||||| || || || || |||| |
Sbjct 88078 TATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACGAGGAAGCACGACGACAACT 88019
Query 63601 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 63660
| || || || ||||| || | || || || ||||| || || | || | |
Sbjct 88018 GCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGG 87959
Query 63661 AAA-GTAGATTGTACGTCTCAATAGCTGAGTCTATAT----CCCATTGATGAATTCCTAC 63715
| | |||| ||||| ||||||| | | || || | ||| |||| || ||
Sbjct 87958 ACATGTAG-TTGTAGGTCTCAAGAACCCTCTCGATGTTGTCCCCCCAGATG----CCAAC 87904
Query 63716 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 63753
||||||||||| | ||||||||| || | || ||||
Sbjct 87903 AGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGA 87866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622939771354640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |