Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq50 102 8e-17
>seq50
Length=202051
Score = 102 bits (112), Expect = 8e-17
Identities = 420/657 (64%), Gaps = 23/657 (4%)
Strand=Plus/Minus
Query 148242 CCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAA 148301
|| ||| |||||| || ||||| || ||||||| || | ||| ||||| ||| |
Sbjct 88511 CCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGG 88452
Query 148302 CCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCTTCAT 148360
||||| ||||||| ||||||||||| | ||| | || | || ||| ||| | ||||||
Sbjct 88451 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCT-TCTCTACACGCTTCAT 88393
Query 148361 AAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGC--------CTTCATATCC 148412
|| ||||| || |||| | ||||| | || || ||||| |||| | |||
Sbjct 88392 GAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCC 88333
Query 148413 TCGGCACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCG 148472
|| | || ||| || || | || || || || |||||||| |||||
Sbjct 88332 GTGG-----TTCTTCCGC---AGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCC 88281
Query 148473 ATGTATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCA-T 148528
| ||| | || | || || | | || || || |||||||| | || ||| |
Sbjct 88280 AGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCG-GGCAGT 88222
Query 148529 GCTATTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGGATTCAAT 148588
| | || || |||||||| ||| | || | || ||||| ||| | ||
Sbjct 88221 GTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGAT 88162
Query 148589 TTTACTATTGGTGGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGA 148648
| |||||| || || | ||| || ||||| ||||| || | || ||
Sbjct 88161 GTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCTCCAGCCATCTTGGA 88102
Query 148649 TATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTT 148708
||||||||||| || || || | ||||||||| | ||| |||||||| | ||||
Sbjct 88101 GATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTC 88042
Query 148709 AAGCAGGTAGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACT 148768
|| ||| ||||||| |||| || | | | |||| | || || |||||
Sbjct 88041 AACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGA 87982
Query 148769 AGCGTGAGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTTTCGATGTC 148828
||||| ||||| | ||| ||| | | |||| || | | | || |||||||
Sbjct 87981 CGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTT 87922
Query 148829 ATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCGACGAC 148885
|| || || | ||| ||||||||||||||||| || |||| |||||||||
Sbjct 87921 GTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGAC 87865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478656691950880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |