Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq50 102 8e-17 >seq50 Length=202051 Score = 102 bits (112), Expect = 8e-17 Identities = 420/657 (64%), Gaps = 23/657 (4%) Strand=Plus/Minus Query 148242 CCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAA 148301 || ||| |||||| || ||||| || ||||||| || | ||| ||||| ||| | Sbjct 88511 CCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGG 88452 Query 148302 CCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCTTCAT 148360 ||||| ||||||| ||||||||||| | ||| | || | || ||| ||| | |||||| Sbjct 88451 CCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCT-TCTCTACACGCTTCAT 88393 Query 148361 AAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGC--------CTTCATATCC 148412 || ||||| || |||| | ||||| | || || ||||| |||| | ||| Sbjct 88392 GAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGACCTCTTCCTTTCC 88333 Query 148413 TCGGCACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCG 148472 || | || ||| || || | || || || || |||||||| ||||| Sbjct 88332 GTGG-----TTCTTCCGC---AGGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCC 88281 Query 148473 ATGTATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCA-T 148528 | ||| | || | || || | | || || || |||||||| | || ||| | Sbjct 88280 AGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGACGTATCG-GGCAGT 88222 Query 148529 GCTATTAAAAACACGCAATGCAGGTCCCAATCCCGCCGCAGTTCCGTTTGTGGATTCAAT 148588 | | || || |||||||| ||| | || | || ||||| ||| | || Sbjct 88221 GTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGCCAGCGAT 88162 Query 148589 TTTACTATTGGTGGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGA 148648 | |||||| || || | ||| || ||||| ||||| || | || || Sbjct 88161 GTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCTCCAGCCATCTTGGA 88102 Query 148649 TATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTT 148708 ||||||||||| || || || | ||||||||| | ||| |||||||| | |||| Sbjct 88101 GATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTC 88042 Query 148709 AAGCAGGTAGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACT 148768 || ||| ||||||| |||| || | | | |||| | || || ||||| Sbjct 88041 AACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAACAGCGTTGGCGA 87982 Query 148769 AGCGTGAGTGAACAGCTTTGCCCGCATCAATCTATAGGATTCGATAGCGCTTTCGATGTC 148828 ||||| ||||| | ||| ||| | | |||| || | | | || ||||||| Sbjct 87981 CGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACCCTCTCGATGTT 87922 Query 148829 ATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCGACGAC 148885 || || || | ||| ||||||||||||||||| || |||| ||||||||| Sbjct 87921 GTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGCTCGACGAC 87865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656691950880