Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq50 387 4e-102 >seq50 Length=202051 Score = 387 bits (428), Expect = 4e-102 Identities = 1077/1633 (66%), Gaps = 37/1633 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| ||||| ||||||| ||| |||||| || || | | | | ||| |||| || Sbjct 87970 TTCACACACGCGTCGCCAACGCTGTTCAATGCCGGCACGCCTCAGGCGCAGTTGTCGTCG 88029 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || ||| ||||| |||| ||| || || |||| Sbjct 88030 TGCTTCCTCGTTGACATGAAGGAGGACAGCATTGAGGGCATCTATGATACCCTGAAGACC 88089 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||||| || || || ||||| | | || ||||| | ||||| Sbjct 88090 TGTGCCATGATCTCCAAGATGGCTGGAGGCATTGGCCTCAACG-TCCACCGCATCCGTGC 88148 Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 || | | ||||| ||| ||||| || || ||||| | | || ||| | Sbjct 88149 CACCGG-CTCCTACAT-CGCTGGCACCAACGGCACGTCCAATGGCATCATCCCTATGTTG 88206 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 ||||| || |||| ||||| | |||||||| |||||||| |||||| || || Sbjct 88207 CGTGTCTTCAACAACACTGCCCGATACGTCGATCAGGGTGGCAATAAGCGCCCCGGTGCT 88266 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| || || || ||||| || || ||| | || ||||| || || || ||||| Sbjct 88267 TTTGCCATCTACCTGGAGCCATGGCACGCTGATGTCTTCGAGTTCCTCGACCTGCGGAAG 88326 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| ||||| || || | ||||| ||||| || ||| ||| || ||| | | || Sbjct 88327 AACCACGGAAAGGAAGAGGTCCGTGCTCGTGACCTCTTCCTTGCCCTCTGGATCCCGGAT 88386 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||||||| || ||| | | | | | ||| | || | ||||| |||| | Sbjct 88387 CTCTTCATGAAGCGTGTAGAG--AAGAACGGCGACTGGACTCTGATGTGCCCCAACGAGT 88444 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || || ||| |||| | || || || | | ||||| ||||| ||||| || Sbjct 88445 GCCCCGGCCTTGCCGACTGCTACGGCGAGGAGTTCGAGGCTCTGTACGAGAAGTACGAGC 88504 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 ||||| | | ||||| | || |||||||| |||| ||||||| | || Sbjct 88505 GCGAGGGTCGCGGCCAAAAGACCCTGAAGGCGCAGAAGCTCTGGTATGCCATCCTCGAGG 88564 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | || | |||||||| | |||| ||||||||||| ||| |||||||||| || Sbjct 88565 CTCAAACCGAGACAGGCAACCCCTTCATGTTGTACAAGGATCACGCCAACCGCAAGAGCA 88624 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260 ||||| || ||||||| || |||| |||| |||||| || || ||||| || || || Sbjct 88625 ACCAGAAGAACCTTGGCACCATTC-GCAGCTCCAACCTTTGCACTGAGATCATCGAGTAT 88683 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-- 364318 | ||||| || ||| ||| || || ||||| ||||| ||||| || || ||| | Sbjct 88684 TCTGCTCCTGATGAGGTTGCTGTCTGCAACCTGGCGTCTATCGCCCTGCCACAGTTCGTC 88743 Query 364319 ---TAAAAG-ATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTA 364372 || || ||| | | || |||| || | || || ||| | || | | Sbjct 88744 GACTACGAGAATGAGCGCTATAACTTCCAGTTGCTGCACGAAGTCACCCAGGTCGTCGT- 88802 Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCC-----GA 364427 | |||| || ||||| | ||||| | || | ||||| |||| || ||| || Sbjct 88803 -TCGCAACCTGAACAAGATCATCGATATCAACCACTATCCTGTTCCGGAGGCCCGCAAGA 88861 Query 364428 GCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTT 364487 || || ||||| || || || ||||| | || || ||||| || || || | ||| Sbjct 88862 GC-----AACATGCGCCACCGTCCTATTGGCGTGGGCGTCCAGGGTCTGGCCGATGCTTT 88916 Query 364488 TATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTT 364547 || ||| ||| | || || || ||||| ||||||| || || ||| ||||||| Sbjct 88917 CTTGGCCCTCCGCATGCCTTTCGAGTCACCTGAGGCTCGTGAGCTGAACAAGCAGATCTT 88976 Query 364548 TGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAA 364607 || || || || ||||| | || || |||||||| | || || | || Sbjct 88977 CGAGACCATCTACCACGCCGCCCTCACCGCATCGTGTGACATTGCCAAGGTTGATGGCCC 89036 Query 364608 GTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGG-- 364665 ||||| | || ||||| || || | || ||||| | | |||| || | ||| Sbjct 89037 CTACTCATCATACGAGGGATCTCCCGTCTCCCAGGGTATCCTGCAGTACGACATGTGGAA 89096 Query 364666 -AATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCA 364724 ||||||| ||| |||| | ||| ||||||| | | |||| | ||| |||| Sbjct 89097 CAATGTCAAGCCCTCTGATCTCTGGGACTGGGACGCCTTGAAGGCCAAGATCAAGCAGCA 89156 Query 364725 TGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784 ||| |||||| | | | | |||||||||||||| || || ||| | |||||||| Sbjct 89157 CGGTGTCCGCAACAGCTTGTTGATGGCGCCCATGCCCACTGCCTCGACTTCGCAGATCCT 89216 Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844 || |||||||||||||| || || | |||| ||| | ||| ||||| || || | Sbjct 89217 GGGCAACAACGAGTGCTTTGAGCCCTATACATCCAACATCTATCAGCGCCGCGTGCTCGC 89276 Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904 || || || | || || ||| | || |||||||||| | | || ||||| Sbjct 89277 TGGCGAGTTCCAAGTTGTCAATCCATGGCTGCTCAAGGATCTGGTGCAGTGTGGTCTGTG 89336 Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTC-CAG 364963 | ||| | |||||||| |||||||| | |||| ||| | ||||| |||| ||| Sbjct 89337 GTCTGAGGACCTGAAGAACCGCATCATCGCTGAGGATGGCTCTATCCAGAATATTCGCAG 89396 Query 364964 GATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC 365023 | | ||||| || | ||| | | ||||| ||||| ||||| || || | | || Sbjct 89397 CA-TCCCAGATGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCGCAGAGGACCA 89455 Query 365024 TCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTAT 365083 || | | ||||| |||||||| ||||| || ||| ||| ||||||| | ||| || Sbjct 89456 TCGTGCAGATGGCTGCCGATCGTGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATAC 89515 Query 365084 TCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCG 365143 |||| | |||| | | |||| | || |||||| ||| ||| ||||| | Sbjct 89516 ACATGCGTGAGCCTTCTATGGGCAAGATCACTAGCATGCACTTCACCGGTTGGAAGCTGG 89575 Query 365144 GTCTTAAGACAGG 365156 |||| ||||| || Sbjct 89576 GTCTCAAGACTGG 89588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303337668946028