Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq50 187 2e-42 seq104 134 1e-26 seq42 111 1e-19 seq8 84.2 2e-11 >seq50 Length=202051 Score = 187 bits (206), Expect = 2e-42 Identities = 934/1460 (64%), Gaps = 52/1460 (4%) Strand=Plus/Minus Query 145056 GATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGG 145115 ||||||| || || |||||||| || | ||| || ||| ||| | ||| || || ||| Sbjct 89299 GATTGACAACTTGGAACTCGCCAGCGAGCACGCGGCGCTGATAGATGTTGGATGTATAGG 89240 Query 145116 GTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCA 145175 | ||||| ||||||| ||||||||||| || | |||| || ||||||||| ||||| Sbjct 89239 GCTCAAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCA 89180 Query 145176 CCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTA--GCGTACCCCAATC 145233 ||| || ||||| | ||||||| |||||| | |||| | |||| |||| || Sbjct 89179 TCAACAAGCTGTTGCGGACACCGTGCTGCTTGATCTTGGCCTTCAAGGCGT--CCCAGTC 89122 Query 145234 CCATAGCGAAGTCGGCCTCAC---GTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGC 145290 ||| || || ||| | || || ||||||||||||||||| || |||| | | | Sbjct 89121 CCAGAGATCAGAGGGCTTGACATTGTTCCACATGTCGTACTGCAGGATACCCTGGGAGAC 89062 Query 145291 GGG-GCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCT 145349 ||| | | ||| | | || ||| ||| | ||||| | || || || Sbjct 89061 GGGAGATCCCTCG-TATGATGAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGG 89003 Query 145350 CCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGC 145409 || ||| || || || |||||| || ||| |||| ||| || ||| Sbjct 89002 TGAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCTCAGGTG 88943 Query 145410 TCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGA 145469 |||| | |||||||| || | ||||||||||| || ||||| | |||||||| | Sbjct 88942 ACTCGAAAGGCATGCGGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAA 88883 Query 145470 TGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGA 145529 | || || || |||||||||| | | ||| | | |||||| | || |||| Sbjct 88882 TAGGACGGTGGCGCATGTTGCTCTTGCGGGCCTCCGGAACAGGATAGTGGTTGATATCGA 88823 Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAA---TGTGCCGCAACTTTTCAAAGT 145586 | || || |||| ||| || || || |||| || | |||| ||||| | |||| Sbjct 88822 TGATCTTGTTCAGGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAAC---TGGAAGT 88766 Query 145587 CAAACCG---AGCCTCGTCAACGACCACACAGCTATTG-ACGGCGATCGACGCCAAATTA 145642 | | || | ||||| |||| | || | | | |||||| ||||||| || Sbjct 88765 TATAGCGCTCATTCTCGTAGTCGAC----GAACTGTGGCAGGGCGATAGACGCCAGGTTG 88710 Query 145643 CAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACAT 145702 || || || ||| || | | || | | |||||| | ||| | ||| | Sbjct 88709 CAGACAGCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTG 88650 Query 145703 TTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCG-TCCTTGTAGAGCAT 145761 ||||| || || || | ||| || || || | |||| || | |||||||| | ||| Sbjct 88649 CGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-GCGTGATCCTTGTACAACAT 88591 Query 145762 GTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGC 145818 | | || ||| ||||| || | ||| | ||| | | | | || | |||||| Sbjct 88590 GAAGGGGTTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGC---TTCTGCGC 88534 Query 145819 ACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGC 145878 || || ||| ||| ||||| ||||| ||| ||| || |||| ||| | Sbjct 88533 CTTCAGGGTCTTTTGGCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTC 88474 Query 145879 GGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCC 145938 |||||||| |||| |||||||| |||| |||||| |||||||| | ||| |||| Sbjct 88473 CTCGCCGTAGCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCC 88414 Query 145939 GTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCG 145998 ||| | || |||| ||| || | ||| || | ||| || || | | ||| || Sbjct 88413 GTTCTTCTCTACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACG 88354 Query 145999 CGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT-ATAGATGTCCG 146057 || | || || || ||| | || | || | ||| ||| || | Sbjct 88353 AGCACGGACCTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGA-ACTCGAAGACATCAG 88295 Query 146058 CGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCA 146114 ||||||| || || | |||| ||| | || || || ||||||||||| || | Sbjct 88294 CGTGCCATGGCTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGA 88235 Query 146115 CGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGT 146174 ||| || | ||||||| ||||| |||| ||| || || ||| ||| ||||| Sbjct 88234 CGTATCGGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGT 88175 Query 146175 TCGT---AGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGAC 146231 | || || | || || |||| || || | || || || || | ||| | | Sbjct 88174 TGGTGCCAGCG---ATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTGAGGCCAATGC 88118 Query 146232 CGCC-GCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAAT 146289 | || ||| | |||||| || ||| || ||| | || || || |||||||| ||||| Sbjct 88117 CTCCAGCCAT-CTTGGAGATCATGGCACAGGTCTTC-AGGGTATCATAGATGCCCTCAAT 88060 Query 146290 GCTATC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCC 146347 ||| || |||| ||| | | || |||||||| ||| ||||||| ||||| || Sbjct 88059 GCTGTCCTCCTTC--ATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCG 88002 Query 146348 GCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTT 146407 || ||||| ||| || |||||| || || | || | ||| || || Sbjct 88001 GCATTGAACAGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTC 87942 Query 146408 TCGA-TAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTG 146466 || | | | ||| | |||| ||| || ||||| | |||||| ||||| |||||||| Sbjct 87941 TCAAGAACCCTCTCG-ATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTG 87883 Query 146467 TTGGGGCCGCTCCGCCACTT 146486 || |||||||| | |||| Sbjct 87882 CTGTGGCCGCTCGACGACTT 87863 >seq104 Length=128129 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | || |||||||| || |||||||| ||| | Sbjct 59657 CCACCGCGGAGACGGAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 59716 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || ||| |||| | ||||||||| ||||||||| Sbjct 59717 AGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 59776 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| ||||| | Sbjct 59777 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCACC 59836 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| ||||| || ||||| |||||||| Sbjct 59837 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 59883 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 59885 CCGCCACGCAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 59944 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| | || | |||||||||||||||||| Sbjct 59945 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGG 60004 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 60005 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACC 60064 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| || || || ||||| |||||||| Sbjct 60065 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 60111 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| || || | ||||||||||| ||||||||||| || | Sbjct 59429 CCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 59488 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || ||||||||||| ||| |||| | |||||||||||| || || Sbjct 59489 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 59548 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | ||||| | || || | Sbjct 59549 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACC 59608 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || || || || ||||| || ||||| Sbjct 59609 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 59655 >seq42 Length=213763 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| || | || | ||| |||||||| || |||||||| ||| Sbjct 68278 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 68219 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| | ||||| ||||| || || Sbjct 68218 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGA 68159 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 68158 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 68099 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || ||||| |||||||||| Sbjct 68098 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 68050 >seq8 Length=406722 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | ||||| ||||| ||||||||||| ||| ||| Sbjct 173811 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 173752 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||| || ||||||||||| || || ||||| ||| || ||||| | | Sbjct 173751 TCAATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 173692 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| ||||| | || | ||| | || || || || || || || |||| Sbjct 173691 CGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 173632 Query 131225 A 131225 | Sbjct 173631 A 173631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007171247360