Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq104 105 6e-18 >seq104 Length=128129 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | ||||| || ||||||| |||| ||||||||||| Sbjct 59883 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCC 59824 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || || || || || Sbjct 59823 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGATCAG 59764 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || || | || || | |||||| || ||| ||||| Sbjct 59763 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACTCTGTCCGACTACAAC 59704 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || |||||||| || Sbjct 59703 ATCCAGAAGGAGTCCACGCTCCA 59681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433322961749510