Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq86 125 1e-23
seq70 95.1 2e-14
seq11 93.3 9e-14
>seq86
Length=153077
Score = 125 bits (138), Expect = 1e-23
Identities = 293/432 (68%), Gaps = 14/432 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | ||| || | || ||||| ||||||||||||||| ||||| ||
Sbjct 136645 TCGAAGAAGTTGGTCTTCCCGCCAAGGGAGATGTTCTCCATGAAGTCGAAAGGGTTAGTA 136586
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| ||||| ||| | ||| || || |||| || ||||| || || || || |
Sbjct 136585 GACTTGTAGATCTTCTCGTTGCCGAGAGCGACGAGGAGACGGTCGGCGACGAATTCGATG 136526
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||||| | | |||||||| | || ||| || | ||||| | |
Sbjct 136525 TACTGCTTCATCAAGTTGGCATTCATGCCGAGCAGGGCACACGGCAAGGCCTCGGTCAGG 136466
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTG-TGC---CAGAGA 251798
|| ||||| || ||||||| || || | || || | ||| | ||| | | |
Sbjct 136465 AACTCCTTCTCAATGGCAACAGCATCGGTAATGATGGCTTCCACGCGCTGCTTGCTGGGG 136406
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAA-CTGTTGGTGCAGACCCTCG 251856
| | |||||| || | |||| |||| | || || || | || |||||||||||||
Sbjct 136405 CGG-TTGTTC---AGGTGTGAGAACAGCAAGCAGGCGAAGTCAGT--GTGCAGACCCTCG 136352
Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916
|| ||| ||||| |||||||| | |||||||||||||| ||||| ||| | |||
Sbjct 136351 TCACGAGAGATGAGTTCGTTGGAGAAGGTCAGGCCAGGCATCAGACCACGCTTCTTCAGC 136292
Query 251917 CAGAAGATTGC-GCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAAC 251975
|||||||| | || |||| ||| ||| | | ||| |||||| | |||||||
Sbjct 136291 CAGAAGATGGAAGCGAAAGCG-CCACTGAAGAAAATACCTTCGACAGCAGCAAATGCAAC 136233
Query 251976 AAGGCGCTCAGC 251987
|||||||| |||
Sbjct 136232 AAGGCGCTGAGC 136221
>seq70
Length=170380
Score = 95.1 bits (104), Expect = 2e-14
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 279695 AGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACT 279754
||| || |||||||| || ||||||||||||||||| || ||| |||||||||| || |
Sbjct 7651 AGTCGGCTCTCTGTCTGGCGGTTGGAAGATGAAGCTCGCTCTCGCTCGCGCCATGCTGCA 7710
Query 279755 GCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGA 279799
| ||||||||||| || || || || || || |||||| ||||
Sbjct 7711 GAAGGCCGATGTCCTCCTCCTGGACGAACCGACTAACCACTTGGA 7755
Score = 93.3 bits (102), Expect = 9e-14
Identities = 133/185 (72%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| ||||| ||||| || ||||| || || ||||| | || || |||||||||
Sbjct 8133 TCATTGGTCCCAACGGTGCTGGCAAGTCGACTCTCATCAAGCTGCTCACCGGCGAGACC- 8191
Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292
| ||| | || | | | |||||| ||||| |||| || | ||| || |||
Sbjct 8192 ATCCCAAGTACCGGAAAGGTCGAGAAGCACCCCAATCTGCGTATCGGATACATCAAGCAG 8251
Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352
||||| | | ||| |||||| |||||||| | ||| || ||||| ||| | ||||||
Sbjct 8252 CACGCCCTGGAACACGTCGAGATGCACCTGGAGAAGACGCCCAACCAGTACCTGCAGTGG 8311
Query 280353 CGCTA 280357
|||||
Sbjct 8312 CGCTA 8316
>seq11
Length=391361
Score = 93.3 bits (102), Expect = 9e-14
Identities = 140/198 (71%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219
||| || |||| ||||| || ||||| ||||| || ||||||||||| |||| || ||
Sbjct 75473 CTCCCGTATTGCCGTCATCGGTCCCAACGGTGCCGGCAAGTCTACCCTGGTCAACGTTCT 75532
Query 280220 GACTGGCGAG---ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGAT 280276
|| ||| | || |||| ||||| | ||| ||| ||||| || ||
Sbjct 75533 CTGCGGTGAGCTGATCC---CCACCGAGGGTGAGATCTGGTCGCACGAGAACATCCGTAT 75589
Query 280277 GGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAA 280336
|| ||| || ||||||||||| ||||||||| ||||||||||||| ||| |||
Sbjct 75590 TGCGTACATCAAGCAGCACGCTTTTGCCCACATCGATAACCACCTGGACAAGACGCCTTC 75649
Query 280337 CCAATACATTCAGTGGCG 280354
| |||||||| |||||
Sbjct 75650 GGAGTACATTCAATGGCG 75667
Score = 87.8 bits (96), Expect = 4e-12
Identities = 144/203 (71%), Gaps = 11/203 (5%)
Strand=Plus/Plus
Query 279701 TTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG- 279759
||| ||||| ||||||||||||||||||||||| || || ||| | || || |
Sbjct 75017 TTCCCTGTCCGGTGGTTGGAAGATGAAGCTGGCTCTGTGCCGTGCCGT----CTTCGAGA 75072
Query 279760 ---CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCT 279816
|||| | || ||||| || ||||| ||||||||| |||| || ||||| ||||
Sbjct 75073 ACCCCGACATTCTGCTGCTGGACGAGCCCACCAACCACTTGGATGTCAAGAACGTGGCCT 75132
Query 279817 GGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACT 279876
|||| | | |||||| | | | | | ||| | ||| |||| ||||| |||||||
Sbjct 75133 GGCTTGAGGACTACCTCAAGA-ACAGCA-CATG-CACGTCCATCATGGTCTCCCACGACT 75189
Query 279877 CTGGCTTCCTAGATGCCGTGTGC 279899
|||| ||||| | |||||||
Sbjct 75190 CTGGTTTCCTGAACCGCGTGTGC 75212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027824236622314
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |