Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14]
954 sequences; 42,624,563 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq42 187 5e-42
seq104 176 8e-39
seq8 134 3e-26
seq11 116 7e-21
seq3 109 1e-18
seq70 86.0 1e-11
>seq42
Length=213763
Score = 187 bits (206), Expect = 5e-42
Identities = 180/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||| ||| || |||||||| || |||||||| || ||||||
Sbjct 68278 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 68219
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || || | |||||||| || |||
Sbjct 68218 AGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGA 68159
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| |||||||| ||||||||||| | || || ||
Sbjct 68158 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 68099
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| | |||||| || || |||||||||||||||||||| |||||||| |||
Sbjct 68098 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATG 68048
>seq104
Length=128129
Score = 176 bits (194), Expect = 8e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||||||| ||||| ||||| || || ||||| || || ||
Sbjct 59429 CCACCACGCAGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAC 59488
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| || ||||| | |||||| || ||||| || || | || ||||| || |||
Sbjct 59489 AGCGTCCGGCCGTCTTCCAGCTGCTTGCCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 59548
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||||||||| ||||| ||| ||||| || || | |||||| ||
Sbjct 59549 ATACCCTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTATCCGATGATTCCACC 59608
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || ||||| |||||||||||||| || |||||
Sbjct 59609 TCGAGGGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 59655
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | || | ||| ||||||||||| || |||||||| || |||||
Sbjct 59657 CCACCGCGGAGACGGAGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 59716
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| ||||| | || || || || ||
Sbjct 59717 AGAGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 59776
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| ||||| ||| ||||||||||| | || || ||
Sbjct 59777 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGACGACTCCACC 59836
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || ||||| ||||||||||| ||||||||
Sbjct 59837 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 59883
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| ||||| ||||| || |||||||| || ||||||
Sbjct 59885 CCGCCACGCAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAG 59944
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || ||
Sbjct 59945 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGG 60004
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| |||||||| ||||||||||| | || || ||
Sbjct 60005 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACC 60064
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || || ||||||||||||||||| ||||||||
Sbjct 60065 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 60111
>seq8
Length=406722
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| || | |||||| |||||||| ||
Sbjct 173809 TTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 173750
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || ||||| || || || || || |||||||| || ||||| ||||||||| |||
Sbjct 173749 AATCGCTGTTGATCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 173690
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | |||||| || || ||||| |||||||| |||||
Sbjct 173689 ATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 173631
>seq11
Length=391361
Score = 116 bits (128), Expect = 7e-21
Identities = 433/669 (65%), Gaps = 35/669 (5%)
Strand=Plus/Minus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
||||| || ||||||| || ||| ||||||||||||| || || ||| |||||
Sbjct 75667 CGCCATTGAATGTACTCCGAAGGCGTCTTGTCCAGGTGGTTATCGATGTGGGCAAAAGCG 75608
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099
||||| | |||||| || || ||||| ||| ||| | | | || || ||
Sbjct 75607 TGCTGCTTGATGTACGCAATACGGATGTTCTCGTGCGACCAGATCTCACCCTCGGTGGGG 75548
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
| || || ||| ||| || |||| || |||| |||||| ||||| ||||| || ||
Sbjct 75547 ATCAGC-TCACCGCAGAGAACGTTGACCAGGGTAGACTTGCCGGCACCGTTGGGACCGAT 75489
Query 225160 CACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAA-----GATCTCA 225214
||| |||| ||||| || | ||| || | | | | ||| | || |
Sbjct 75488 GACGGCAATACGGGAGCCCAGGGAGCACTGGAAGGTGATAT--CCGAAATCTGGGGCTTA 75431
Query 225215 GGGCCAGTTTGGTAAGCAAAGGCCAC------GCCACGCAGCTTCATGATGGCACGGTCC 225268
||| | |||| ||| ||| | ||||||| ||| || | ||
Sbjct 75430 GGGGTGTTGGGGTACTGGAAGCCCATCTTGTTGGCACGCAG------GATAGCCTTGGCC 75377
Query 225269 TTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCC 225328
|||| | | ||| || ||||| || ||||| ||||| ||| || | | |
Sbjct 75376 TTGGTCTTGACACCATCGAGGAAACCAGGCTCAGGGAAGGAGAACTCCATCTCGGATGCG 75317
Query 225329 TTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCC--ACGAAAGCAGACAGGTTTC 225386
||| ||| |||| || ||| |||| | | |||| ||||| | |||||| |
Sbjct 75316 CCCAGCTCGAAGTACGACTTAGCAGCGGG--GTTCTGCCTCACGAAGTCCTCCAGGTTGC 75259
Query 225387 CGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGT 225446
| || | || ||||||||| | || |||| | || || | |||||| ||
Sbjct 75258 CCTTGTACGTCTTGAGCTTGAAGCGCT---CGTAGTTGACGATGTACTGGCACACGCGGT 75202
Query 225447 CAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTGAGG 225505
||||| |||||||||||||| || |||||||||| || || | | |||||||
Sbjct 75201 TCAGGAAACCAGAGTCGTGGGAGACCATGATGGACGTGCATGTGCT----GTTCTTGAGG 75146
Query 225506 TGCGTGATGA-GCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564
| || | | |||| |||||||| |||| |||| |||||| || || |||||||| ||
Sbjct 75145 TA-GTCCTCAAGCCAGGCCACGTTCTTGACATCCAAGTGGTTGGTGGGCTCGTCCAGCAG 75087
Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624
||| ||||| | | || || ||| || |||| ||||||||| ||||| || ||
Sbjct 75086 CAGAATGTCGGGGTTCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAACCACC 75027
Query 225625 GGACAGGGA 225633
|||||||||
Sbjct 75026 GGACAGGGA 75018
>seq3
Length=522148
Score = 109 bits (120), Expect = 1e-18
Identities = 189/268 (71%), Gaps = 5/268 (2%)
Strand=Plus/Plus
Query 275303 GGTTTCAATATC-TCGTGCGCGACAACCGGCCGCATATGAAGAAGGCCGGCAACCTCCGG 275361
||||||||| | | ||||| || | || || | |||||||||| || |||||||||
Sbjct 337309 GGTTTCAATTACATTGTGCGGGATGATCGACCTCGATTGAAGAAGGCAGGTAACCTCCGG 337368
Query 275362 TCCGCCTTTACCAAGACAGACGGCGAATTCTTTGTCATCTTTGACGCCGACTTCTGCCCA 275421
| || ||||| |||||| || || || ||||||||||||||||| |||||||| ||
Sbjct 337369 TGGGCATTTACACGGACAGATGGAGACTTTTTTGTCATCTTTGACGCAGACTTCTGTCCT 337428
Query 275422 AGGCCCGACTTCCTCGAGGAGACACTTGGC-AGGATGAAGGCAGATCCCACGATTGCCAT 275480
| || |||||| || | ||| | | | || | | | ||| || ||| |||||
Sbjct 337429 CGACCAGACTTCATCAAAGAGCTTATCGTCGAGCACCTTGAC-GATGACAAGATCGCCAT 337487
Query 275481 CTTCCAAACTCCCCAGTTCTTCGAGCAGCGCA-ATGAGCAGAACTACGTGGAGAAGGGAG 275539
|||| | ||| ||||| ||| | | || ||||||||| | || ||| |||| |
Sbjct 337488 TGTCCAGAGTCCACAGTTTTTC-CGTGTCACAGATGAGCAGACGTGGGTTGAGCAGGGGG 337546
Query 275540 CCGGCGCCGTCCAGGAGCTCTTCTATCG 275567
|||| || || ||||||||||| ||
Sbjct 337547 CCGGTGCTACGCAAGAGCTCTTCTACCG 337574
>seq70
Length=170380
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| |||||||| | |||||||||||| ||| | |||||||| |||| | || | |
Sbjct 8316 TAGCGCCACTGCAGGTACTGGTTGGGCGTCTTCTCCAGGTGCATCTCGACGTGTTCCAGG 8257
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| ||||| | ||| | || |||| ||||| |||||| || || | |
Sbjct 8256 GCGTGCTGCTTGATGTATCCGATACGCAGATTGGGGTGCTTCTCGACCTTTCCGGTACTT 8197
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| | |||||||||||| | ||||||||| || | |||||| ||||| ||||| |||
Sbjct 8196 GGGATGGTCTCGCCGGTGAGCAGCTTGATGAGAGTCGACTTGCCAGCACCGTTGGGACCA 8137
Query 225158 AT 225159
||
Sbjct 8136 AT 8135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921611409652880
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