Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq50 419 4e-112 seq86 241 2e-58 >seq50 Length=202051 Score = 419 bits (464), Expect = 4e-112 Identities = 1154/1745 (66%), Gaps = 70/1745 (4%) Strand=Plus/Minus Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGA-GGT 243935 ||| || |||||| |||||||| ||||| | || || || ||||| | || ||| Sbjct 89511 GTTCAGCGACTGGGACTGGTCGATGAAGGCACCACGATCGGCAGCCATCTGCACGATGGT 89452 Query 243936 CCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTT 243995 ||| ||| || ||||| | | |||||||||| || ||||| || || |||| | | Sbjct 89451 CCT-CTGCGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCATCTGGGATGC-TG 89394 Query 243996 CGA-TGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCAC 244054 ||| | ||||| | ||||| | | |||||| || | || || || |||| Sbjct 89393 CGAATATTCTGGATAGAGCCATCCTCAGCGATGATGCGGTTCTTCAGGTCCTCAGACCAC 89334 Query 244055 AGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG--TTCACCACCTGAAACTCTCCCG 244112 || || | || |||| ||| || ||| | || || || || || ||||| || | Sbjct 89333 AGACCACACTGCACCAGATCCTTGAGCAGC--CATGGATTGACAACTTGGAACTCGCCAG 89276 Query 244113 ACAGCACGCGGCGCTGGTAGAGGTTGC-TGCTGAGCGGCTCGATGCTCTCCGTGTTGCCC 244171 |||||||||||||| |||| |||| || || ||||| | || ||| |||||||| Sbjct 89275 CGAGCACGCGGCGCTGATAGATGTTGGATGTATAG-GGCTCAAAGCACTCGTTGTTGCCC 89217 Query 244172 AGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCG 244231 || ||||||| || ||||| |||||||||| || || || ||||| | || ||| Sbjct 89216 AGGATCTGCGAAGTCGAGGCAGTGGGCATGGGCGCCATCAACAAGCTGTTGCGGACACCG 89157 Query 244232 TGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGT 244291 ||| || ||| | | | ||| ||||||||| | | ||||| | | | | Sbjct 89156 TGCTGCTTGATCTTGGCCTTCAAGGCGTCCCAGTCCCAGAGATC--AGAGGGCTTGACAT 89099 Query 244292 TTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTC 244351 | | ||||||||| ||||||| | |||| | |||||| |||||||| | Sbjct 89098 T----GTTCCACATGTCGTACTGCAGGATACCCTGGGAGACGGGAGATCCCTCGTATGAT 89043 Query 244352 GGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATG 244411 | |||||| || || || ||| | | ||| || ||||||||||| ||||||| Sbjct 89042 GAGTAGGGGCCATCAACCTTGGCAATGTCACACGATGCGGTGAGGGCGGCGTGGTAGATG 88983 Query 244412 GTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGA-----AGGGGATGC 244466 |||||||||||| |||||||| || || |||| ||||||| | || |||| Sbjct 88982 GTCTCGAAGATCTGCTTGTTCAGCTCACGAGCCT-----CAGGTGACTCGAAAGGCATGC 88928 Query 244467 CCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCT 244526 | || ||| | |||||||| ||||| ||||| | ||| || || | ||| ||| Sbjct 88927 GGAGGGCCAAGAAAGCATCGGCCAGACCCTGGACGCCCACGCCAATAGGACGGTGGCGCA 88868 Query 244527 TGTTGGA---GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGA 244583 ||||| ||| ||| || || || || || |||| ||||| | |||||| | Sbjct 88867 TGTTGCTCTTGCG---GGCCTCCGGAACAGGATAGTGGTTGATATCGATGATCTTGTTCA 88811 Query 244584 GGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGAT 244643 ||||||| || | || ||| ||| ||||| ||| |||| || ||| | | Sbjct 88810 GGTTGCGAACGACGACCTGGGTGACTTCGTGCAGCAACTGGAAGT--TA----TAGCGCT 88757 Query 244644 CCTCGGCGATGGTGATCCTCACAAACTCGTTG-AGGGCGACGCTGGCCAGGTTGCAGACG 244702 | | || | || | |||| || | ||||||| |||||||||||||| Sbjct 88756 CATTCTCGTAGTCGA------CGAACT-GTGGCAGGGCGATAGACGCCAGGTTGCAGACA 88704 Query 244703 GCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATG 244762 || ||||| || | | |||| || ||||| ||||| ||||| || ||| Sbjct 88703 GCAACCTCATCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGCTGCGAATG 88644 Query 244763 GTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGC 244822 ||||| |||| || || ||| |||| |||| | |||||||| | ||||||||| Sbjct 88643 GTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGTGATCCTTGTACAACATGAAGGGG 88584 Query 244823 CCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTC 244882 || |||||| || || |||||| | | |||||| | | ||||| | ||| Sbjct 88583 TTGCCTGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGAGCTTCTGCGCCTTCAGGGTC 88524 Query 244883 CTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCA 244941 | | ||| | ||||| |||||| |||||| ||||||||||| ||| | Sbjct 88523 TTTTG-GCCGCGACCCTCGCGCTCGTACTTCTCGTACAGAGCCTCGAACTCCTCGCCGTA 88465 Query 244942 GACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTT 245001 | ||| | |||||||||||| |||||||| ||| |||| |||||| | || Sbjct 88464 GCAGTCGGCAAGGCCGGGGCACTCGTTGGGGCACATCAGAGTCCAGTCGCCGTTCTTCTC 88405 Query 245002 GACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG 245061 || | || ||||||||| || |||||||||||||| |||||||||| | | | Sbjct 88404 TACACGCTTCATGAAGAGATCCGGGATCCAGAGGGCAAGGAAGAGGTCACGAGCACGGAC 88345 Query 245062 CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGG 245121 ||| ||| || |||||||| ||| || | || || ||||| || ||||||| || Sbjct 88344 CTCTTCCTTTCCGTGGTTCTTCCGCAGGTCGAGGAACTCGAAGACATCAGCGTGCCATGG 88285 Query 245122 CTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTC 245181 ||||| ||||| || | || ||||| ||||| ||||| ||||| || | | | || Sbjct 88284 CTCCAGGTAGATGGCAAAAGCACCGGGGCGCTTATTGCCACCCTGATCGA----CGTATC 88229 Query 245182 GAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGC 245237 | || |||||||| |||| |||| | ||||| || || ||||||||||| Sbjct 88228 GGGCAGTGTTGTTGAAGACACGCAACATAGGGATGATGCCATTGGACGTGCCGTTGGTGC 88169 Query 245238 CCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATGCCTAGTCCGCCG 245293 | |||||||| ||| || | | || ||| | ||||| | ||| | || || Sbjct 88168 CAGCGATGTAGGAGCCGGTGGCAC---GGATGC-GGTGGACGTTGAGGCCAATGCCTCCA 88113 Query 245294 GCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCC 245353 || ||||||||| | ||| ||| |||| | ||| || |||||||| ||||||||| Sbjct 88112 GCCATCTTGGAGATCATGGCACAGGTCTTCAGGGTATCATAGATGCCCTCAATGCTGTCC 88053 Query 245354 GACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAAC 245413 |||||||| | || ||||| || |||| ||| | || || ||| | |||||| Sbjct 88052 TCCTTCATGTCAACGAGGAAGCACGACGACAACTGCGCCTGAGGCGTGCCGGCATTGAAC 87993 Query 245414 AGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGA 245473 || || || ||||| || ||| | | | || | | | ||| |||| || | Sbjct 87992 AGCGTTGGCGACGCGTGTGTGAAGAACTTGTTGGACATGTAGTTGTAGGTCTCAAGAACC 87933 Query 245474 GCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTC 245533 ||||||||||| || ||| | ||| | ||| || ||||||| ||| | Sbjct 87932 CTCTCGATGTTGTCCCCCCAGATGCCAACAGCGACACGCATCAGCATGTGCTGTGGCCGC 87873 Query 245534 TCGATGGGT---CCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCA 245590 |||| | | || | | || ||||| | || || |||||||| |||||||| ||| Sbjct 87872 TCGACGACTTTACCGTTGAGT---TTGAGGAGATACGAACGCTCGAGGGTCTTGAAGCCA 87816 Query 245591 AAGTA 245595 ||||| Sbjct 87815 AAGTA 87811 >seq86 Length=153077 Score = 241 bits (266), Expect = 2e-58 Identities = 376/525 (72%), Gaps = 27/525 (5%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 || |||||| |||||||| |||||||| || | |||||| || | || | || Sbjct 136158 CCTTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCCAGGACCGTGAGTCTACC 136217 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 | || || | || || || ||| | || ||||| || || |||||| ||||| ||| Sbjct 136218 TACGCTCAGCGCCTTGTTGCATTTGCTGCTGTCGAAGGTATTTTCTTCAGTGGCGCTTTC 136277 Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || |||||||||||||| ||| || ||| | |||||| || || |||||||| ||||| Sbjct 136278 GCTTCCATCTTCTGGCTGAAGAAGCGTGGTCT-GATGCCTGGCCTGACCTTCTCCAACGA 136336 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 ||||||| | |||||||| ||||| | ||||| |||||| | |||||||| || Sbjct 136337 ACTCATCTCTCGTGACGAGGGTCTGCACACTGACTTCGCCTGCTTGCTGTTCTC---ACA 136393 Query 42872 CCTCAGGCACAA--GCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928 ||| | |||| |||| | ||| |||| || |||||||| || || || || | Sbjct 136394 CCT---GAACAACCGCCCCAGCAAGCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGC 136450 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACG 42987 || |||||||||||||| || || | || |||||| ||||| |||||||||| | Sbjct 136451 CATTGAGAAGGAGTTCCTGACCGAGGC-CTTGCCGTGTGCCCTGCTCGGCATGAATGCCA 136509 Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCA 43047 || | ||| |||||||| | | ||||||||||| |||||| | | |||| Sbjct 136510 ACTTGATGAAGCAGTACATCGAATTCGTCGCCGACCGTCTCCT------CGTCGCTCTCG 136563 Query 43048 GC--CG----CCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCT-CGTTG 43100 || || ||||||| | | ||| |||||||| ||||||||||||| | ||| Sbjct 136564 GCAACGAGAAGATCTACAAGTCTACTAACCCTTTCGACTTCATGGAGAACATCTCCCTTG 136623 Query 43101 GAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 | ||| ||||||||||| ||||||||||| || | ||||||||| Sbjct 136624 GCGGG-AAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 136667 Score = 107 bits (118), Expect = 4e-18 Identities = 220/324 (68%), Gaps = 5/324 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||| || ||| ||||||||| ||||||||||||||| | |||||| Sbjct 135774 ATGTACAAGAAGCACGAGGCGTCCTTCTGGACCGCTGAGGAGATTGACCTGTCTAAGGAC 135833 Query 42369 ACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAAAAACATACT 42424 | || || ||| || || ||| || |||| || | ||| || |||| || Sbjct 135834 CTGCACGACT-GGAACAACCGTTTGACCGATGACGAGAAATACTTCATCTCCCACATCCT 135892 Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484 |||||||| ||||| || |||||||| || || || ||| || | | |||| Sbjct 135893 CGCCTTCTTTGCCGCTTCGGACGGCATCGTTAACGAAAACTTGATCGAGCGCTTCAGTGC 135952 Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544 ||||| ||| |||||| || || |||||||||||||||| || |||||| | Sbjct 135953 TGAGGTCCAGATTCCTGAGGCCCGTTGTTTCTACGGCTTCCAGACCATGATGGAGAACAT 136012 Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAA 42604 ||||| ||| ||| | ||| | | || || ||| ||| || | | |||| | Sbjct 136013 CCACTCCGAGACTTACTCTCTCCTGATTGATACATATATCAAGGAGCCTGCCCAGCGCAC 136072 Query 42605 CGGGCTGTTCAAGGCCATGGAGAC 42628 | || ||||| ||||| ||||| Sbjct 136073 CTACCTCTTCAACGCCATTGAGAC 136096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944327938755040