Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysoporthe_20cubensis_20[genbank_20GCA_5F001282315.1_202015-09-14] 954 sequences; 42,624,563 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq86 111 3e-19 >seq86 Length=153077 Score = 111 bits (122), Expect = 3e-19 Identities = 271/405 (67%), Gaps = 8/405 (2%) Strand=Plus/Plus Query 243353 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 243412 ||||||| |||||| ||| ||| ||||||||||||| | || ||||| ||| Sbjct 136282 CCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAACTCA 136341 Query 243413 TCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTA-TGTATTCAAAGCTCCAG 243471 || ||| |||||||| || ||| | |||| |||| ||| ||| | || | Sbjct 136342 TCTCTCGTGACGAGGGTCTGCACACTGACTTCGCCT-GCTTGCTGTTCTCACACCT---G 136397 Query 243472 AACAAGCTACCATTCGA--AACG-GTCAAACAAATCATCACAGAAGCAGTTGAAAACGAA 243528 ||||| | || | | | || || || ||||| || || || |||| | || Sbjct 136398 AACAACCGCCCCAGCAAGCAGCGCGTGGAAGCCATCATTACCGATGCTGTTGCCATTGAG 136457 Query 243529 AAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATG 243588 ||||| ||| | ||| || | || || || | |||||||| | | | ||| Sbjct 136458 AAGGAGTTCCTGACCGAGGCCTTGCCGTGTGCCCTGCTCGGCATGAATGCCAACTTGATG 136517 Query 243589 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTG 243648 ||||||||||||||||| |||||||| | || |||| || || | ||||| | Sbjct 136518 AAGCAGTACATCGAATTCGTCGCCGACCGTCTCCTCGTCGCTCTCGGCAACGAGAAGATC 136577 Query 243649 TACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAAC 243708 ||||| || | ||||| || | ||| |||||| ||| || ||| ||||| || ||| Sbjct 136578 TACAAGTCTACTAACCCTTTCGACTTCATGGAGAACATCTCCCTTGGCGGGAAGACCAAC 136637 Query 243709 TTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 |||||||| |||||||| |||| || || ||||||| ||| Sbjct 136638 TTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGTCATG 136682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102866519359900